RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 GRID2IPA4D2P6 1211 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 CELF2O95319 508 aaKnown RBP20.99■□□□□ 0.95
PCDH8-202ENST00000377942 RHOT1Q8IXI2 618 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 PRMT7Q9NVM4 692 aaPredicted RBP20.99■□□□□ 0.95
PCDH8-202ENST00000377942 ITIH6Q6UXX5 1313 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 TRIP13Q15645 432 aaPredicted RBP20.99■□□□□ 0.95
PCDH8-202ENST00000377942 TSNAXIP1Q2TAA8 658 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 DHX38Q92620 1227 aaKnown RBP20.99■□□□□ 0.95
PCDH8-202ENST00000377942 AGPAT1Q99943 283 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 KIF1AQ12756 1690 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 ARL4CP56559 192 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 STK4Q13043 487 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 KCTD16Q68DU8 428 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 HDAC11Q96DB2 347 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 SLITRK6Q9H5Y7 841 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 CYP2B6P20813 491 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 HOXA10P31260 410 aaPredicted RBP20.98■□□□□ 0.95
PCDH8-202ENST00000377942 PARVAQ9NVD7 372 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 ANGPTL3Q9Y5C1 460 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 IGSF9BQ9UPX0 1349 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 KBTBD13C9JR72 458 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 IL18RAPO95256 599 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 IRX4P78413 519 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 TMED2Q15363 201 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 ZSCAN26Q16670 478 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 C6orf118Q5T5N4 469 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.98■□□□□ 0.95
PCDH8-202ENST00000377942 FAF2Q96CS3 445 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 TAAR1Q96RJ0 339 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 APEX2Q9UBZ4 518 aa20.98■□□□□ 0.95
PCDH8-202ENST00000377942 SALL3Q9BXA9 1300 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
PCDH8-202ENST00000377942 GLYCTKQ8IVS8 523 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 ACER1Q8TDN7 264 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 RICTORQ6R327 1708 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 IQANK1A0A1B0GTG1 560 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 FMO5P49326 533 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 FKBP1AP62942 108 aaKnown RBP20.97■□□□□ 0.95
PCDH8-202ENST00000377942 ADCY2Q08462 1091 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 SGSM1Q2NKQ1 1148 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 PDLIM2Q96JY6 352 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 SSU72P8A0A1W2PR75 194 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 P4HA2O15460 535 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 SEC23AQ15436 765 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 C9orf131Q5VYM1 1079 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 WDR35Q9P2L0 1181 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 RTN2O75298 545 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 SNRNP35Q16560 246 aaKnown RBP20.97■□□□□ 0.95
PCDH8-202ENST00000377942 DGKDQ16760 1214 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 EFCC1Q9HA90 598 aa20.97■□□□□ 0.95
PCDH8-202ENST00000377942 WDR72Q3MJ13 1102 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 LMNTD2Q8IXW0 634 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 KLHL8Q9P2G9 620 aaPredicted RBP20.96■□□□□ 0.95
PCDH8-202ENST00000377942 NOC2LQ9Y3T9 749 aaKnown RBP20.96■□□□□ 0.95
PCDH8-202ENST00000377942 IQCB1Q15051 598 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 EFHC2Q5JST6 749 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.96■□□□□ 0.95
PCDH8-202ENST00000377942 VPS39Q96JC1 886 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 MROH8Q9H579 483 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 PAMP19021 973 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 SEPT6Q14141 434 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 CCDC144BQ3MJ40 725 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 SMYD2Q9NRG4 433 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 AGAP1Q9UPQ3 857 aa20.96■□□□□ 0.95
PCDH8-202ENST00000377942 CD4P01730 458 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 ZFXP17010 805 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 CHRNA3P32297 505 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 FAM102AQ5T9C2 384 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 USP49Q70CQ1 688 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 SYT2Q8N9I0 419 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 ZKSCAN4Q969J2 545 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 FAM163AQ96GL9 167 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 FBXO28Q9NVF7 368 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 CYP11B2P19099 503 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 SLC1A1P43005 524 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 TMEM132DQ14C87 1099 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 HPS3Q969F9 1004 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 SEC31AO94979 1220 aaKnown RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 RARBP10826 455 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 RECQLP46063 649 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 SF3A3Q12874 501 aaKnown RBP eCLIP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 NUF2Q9BZD4 464 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 ZBBXA8MT70 800 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 PCK1P35558 622 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 VEPH1Q14D04 833 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.95■□□□□ 0.94
PCDH8-202ENST00000377942 PPP1R9AQ9ULJ8 1098 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 HPCAL4Q9UM19 191 aa20.95■□□□□ 0.94
PCDH8-202ENST00000377942 MSH4O15457 936 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 ADORA2BP29275 332 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 SREBF1P36956 1147 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 KCNJ6P48051 423 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 CPT1AP50416 773 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 PRPF31Q8WWY3 499 aaKnown RBP20.94■□□□□ 0.94
PCDH8-202ENST00000377942 SLC38A7Q9NVC3 462 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 TCRBV5S4A2TA0A5A2 114 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 KRT37O76014 449 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 PSMD6Q15008 389 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 OSBPL9Q96SU4 736 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 GPBP1L1Q9HC44 474 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms