RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 GPRC5CQ9NQ84 441 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
HMGCL-202ENST00000374487 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
HMGCL-202ENST00000374487 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
HMGCL-202ENST00000374487 TISP43B9A030 160 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 H3BQF6 201 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 MAFGO15525 162 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 VAMP7P51809 220 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 NPEPPSP55786 919 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 MTFR1Q15390 333 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 PLA2G4FQ68DD2 849 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 OTUD6AQ7L8S5 288 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
HMGCL-202ENST00000374487 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 CBWD1Q9BRT8 395 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
HMGCL-202ENST00000374487 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 MGAMO43451 1857 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 DDX3XO00571 662 aaKnown RBP eCLIP13.1□□□□□ -0.314e-10■■■■□ 21.5
HMGCL-202ENST00000374487 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 OAZ1P54368 228 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 GTF2BQ00403 316 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 SLC7A5Q01650 507 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 HDAC7Q8WUI4 952 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 RUBCNQ92622 972 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 HSPBP1Q9NZL4 362 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 MYH10P35580 1976 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 KCNK3O14649 394 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 RFX1P22670 979 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 DLG4P78352 724 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 GLE1Q53GS7 698 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 STIM2Q9P246 746 aa13.1□□□□□ -0.31
HMGCL-202ENST00000374487 DMGDHQ9UI17 866 aaKnown RBP13.1□□□□□ -0.31
HMGCL-202ENST00000374487 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 PGK2P07205 417 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 TNFAIP3P21580 790 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 GCLMP48507 274 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
HMGCL-202ENST00000374487 MRPS25P82663 173 aaKnown RBP13.09□□□□□ -0.31
HMGCL-202ENST00000374487 PHLDB3Q6NSJ2 640 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 PLEKHH3Q7Z736 793 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 CEP170P1Q96L14 293 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
HMGCL-202ENST00000374487 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
HMGCL-202ENST00000374487 FLRT1Q9NZU1 646 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 VPS18Q9P253 973 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 GABBR1Q9UBS5 961 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 A0A0G2JMZ2 1700 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
HMGCL-202ENST00000374487 A0A0A6YYK5 440 aaPredicted RBP13.08□□□□□ -0.31
HMGCL-202ENST00000374487 P4HA2O15460 535 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 ADCY3O60266 1144 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.31
HMGCL-202ENST00000374487 LRRN2O75325 713 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 MYBL2P10244 700 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 NCKAP1LP55160 1127 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 SP4Q02446 784 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 MORN1Q5T089 497 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 ANO5Q75V66 913 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 PEX26Q7Z412 305 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.31
HMGCL-202ENST00000374487 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 MED4Q9NPJ6 270 aa13.08□□□□□ -0.31
HMGCL-202ENST00000374487 ATP8B3O60423 1300 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
HMGCL-202ENST00000374487 KIF4AO95239 1232 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms