RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ADAT2Q7Z6V5 191 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 MAP7D3Q8IWC1 876 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 DIS3LQ8TF46 1054 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SPOCK2Q92563 424 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 HAUS1Q96CS2 278 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SMC6Q96SB8 1091 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ROPN1BQ9BZX4 212 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 TRIM9Q9C026 710 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ROPN1Q9HAT0 212 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 USP40Q9NVE5 1235 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 TBC1D7Q9P0N9 293 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 DDX25Q9UHL0 483 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SIPA1L3O60292 1781 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 RGPD5Q99666 1765 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 CAPN15O75808 1086 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PYGMP11217 842 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PIM1P11309 404 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 RARGP13631 454 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 YY1P25490 414 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 STX2P32856 288 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ADCY1Q08828 1119 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 USH1GQ495M9 461 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM259Q4ZIN3 620 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PEX26Q7Z412 305 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 FAM133AQ8N9E0 248 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PPFIBP2Q8ND30 876 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 DHRS1Q96LJ7 313 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 KIAA1522Q9P206 1035 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 TDRKHQ9Y2W6 561 aaKnown RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ABCB11O95342 1321 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 HTR3EA5X5Y0 456 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 SPDYE16A6NNV3 312 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 GSC2O15499 205 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 BRAFP15056 766 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 XBP1P17861 261 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 KCNA4P22459 653 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PTGIRP43119 386 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 OLFML1Q6UWY5 402 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.775e-9■■■□□ 17.8
SF3A3-201ENST00000373019 SYNCQ9H7C4 482 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 SLCO1B3Q9NPD5 702 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PFDN4Q9NQP4 134 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PTTG2Q9NZH5 202 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 RGL2O15211 777 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 MAGEB2O15479 319 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF862O60290 1169 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ZBTB7AO95365 584 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 CDR2Q01850 454 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PTK2Q05397 1052 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 EXOC3L4Q17RC7 722 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 COBLL1Q53SF7 1204 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 SPDYAQ5MJ70 313 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 IZUMO2Q6UXV1 221 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 LRRC55Q6ZSA7 311 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 ATP11CQ8NB49 1132 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 C10orf82Q8WW14 230 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 SRPK1Q96SB4 655 aaKnown RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 TFCP2L1Q9NZI6 479 aa10.22□□□□□ -0.77
SF3A3-201ENST00000373019 CCNL1Q9UK58 526 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-201ENST00000373019 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 HARSP12081 509 aaKnown RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 PORP16435 677 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 MCAMP43121 646 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 KLHL30Q0D2K2 578 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 MAPK7Q13164 816 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 CFAP157Q5JU67 520 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM53Q6P2H8 277 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF571Q7Z3V5 609 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 NME8Q8N427 588 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 RIN3Q8TB24 985 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 STRBPQ96SI9 672 aaKnown RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 SIKE1Q9BRV8 207 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 EPB41L1Q9H4G0 881 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 PHTF1Q9UMS5 762 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 R3HDM2Q9Y2K5 976 aaKnown RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 BCORQ6W2J9 1755 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 EXOC3O60645 756 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 VEGFAP15692 232 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-201ENST00000373019 CRABP2P29373 138 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 RCAN1P53805 252 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 GRM2Q14416 872 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 TNIP1Q15025 636 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 TREML1Q86YW5 311 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 ABHD8Q96I13 439 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 SERPINB12Q96P63 405 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms