RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 TNFAIP2Q03169 654 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 MXD4Q14582 209 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-202ENST00000372405 EPC2Q52LR7 807 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 EFCAB12Q6NXP0 572 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 RNF149Q8NC42 400 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 SMC1BQ8NDV3 1235 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 MYRIPQ8NFW9 859 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 CCDC127Q96BQ5 260 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 LENG1Q96BZ8 264 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-202ENST00000372405 FAM213AQ9BRX8 229 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 LACRTQ9GZZ8 138 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 TOPORSQ9NS56 1045 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-202ENST00000372405 SUCLA2Q9P2R7 463 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-202ENST00000372405 GNEQ9Y223 722 aaKnown RBP14.99□□□□□ -0.01
PTPRF-202ENST00000372405 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
PTPRF-202ENST00000372405 SSU72P8A0A1W2PR75 194 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 TMEM88BA6NKF7 163 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 H3BRB1 525 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 SERPING1P05155 500 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 PNMA6AP0CW24 399 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 IRX5P78411 483 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 ARID5AQ03989 594 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 ZNF484Q5JVG2 852 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 ZBTB41Q5SVQ8 909 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 OLFML2BQ68BL8 750 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 PHLDB3Q6NSJ2 640 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 CRELD2Q6UXH1 353 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 HHIPL1Q96JK4 782 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 ZNF668Q96K58 619 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 GPR88Q9GZN0 384 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 MYO6Q9UM54 1294 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 A0A0B4J269 797 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 PMM2O15305 246 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 P4HA2O15460 535 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 EXTL3O43909 919 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 KLRC1P26715 233 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
PTPRF-202ENST00000372405 KRT83P78385 493 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 GRM1Q13255 1194 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 SLC9C1Q4G0N8 1177 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 ARHGAP29Q52LW3 1261 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 CYP4F22Q6NT55 531 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 TMC2Q8TDI7 906 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 APEX2Q9UBZ4 518 aa14.98□□□□□ -0.01
PTPRF-202ENST00000372405 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
PTPRF-202ENST00000372405 CA12O43570 354 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 ACOT2P49753 483 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 MXI1P50539 228 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 EFNA5P52803 228 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 GFPT1Q06210 699 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-202ENST00000372405 IRF5Q13568 498 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 ASIC2Q16515 512 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 SEMA4DQ92854 862 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 JPH2Q9BR39 696 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-202ENST00000372405 ARHGAP39Q9C0H5 1083 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 MINDY3Q9H8M7 445 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 ANKFY1Q9P2R3 1169 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 DNAJC12Q9UKB3 198 aa14.97□□□□□ -0.01
PTPRF-202ENST00000372405 AGO2Q9UKV8 859 aaKnown RBP14.97□□□□□ -0.01
PTPRF-202ENST00000372405 UQCRHLA0A096LP55 91 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 A6NJR5 290 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 F8VZ95 297 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 RBAK-RBAKDNI3L0D1 243 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ABLIM1O14639 778 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 DYNC1LI2O43237 492 aaPredicted RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 AKR1B10O60218 316 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 FAM189A1O60320 539 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 UQCRHP07919 91 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 RGS2P41220 211 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 MAP2K1Q02750 393 aaPredicted RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ENOX2Q16206 610 aaKnown RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 DGKDQ16760 1214 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 TDRD12Q587J7 1177 aaKnown RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 MARCH8Q5T0T0 291 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ARHGEF19Q8IW93 802 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 OLIG1Q8TAK6 271 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 APBA2Q99767 749 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 DUSP10Q9Y6W6 482 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 COL1A2P08123 1366 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ZNF233A6NK53 670 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 VAV2P52735 878 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 CLDN10P78369 228 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 PTK2Q05397 1052 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 KLHL30Q0D2K2 578 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 DRAP1Q14919 205 aaPredicted RBP14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ZPBP2Q6X784 338 aa14.96□□□□□ -0.01
PTPRF-202ENST00000372405 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms