RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 LRFN3Q9BTN0 628 aa20.92■□□□□ 0.94
TMEM53-201ENST00000372235 EMILIN2Q9BXX0 1053 aa20.92■□□□□ 0.94
TMEM53-201ENST00000372235 GBP3Q9H0R5 595 aa20.92■□□□□ 0.94
TMEM53-201ENST00000372235 ZBP1Q9H171 429 aa20.92■□□□□ 0.94
TMEM53-201ENST00000372235 DZANK1Q9NVP4 752 aa20.92■□□□□ 0.94
TMEM53-201ENST00000372235 USP15Q9Y4E8 981 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-201ENST00000372235 A0A1B0GUA9 196 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 ARF4P18085 180 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 CCT6AP40227 531 aaKnown RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 NAMPTP43490 491 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 KRT79Q5XKE5 535 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 CDCA2Q69YH5 1023 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 ELMSAN1Q6PJG2 1045 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 PHLPP2Q6ZVD8 1323 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 APBB1IPQ7Z5R6 666 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 SMG8Q8ND04 991 aaKnown RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 SUSD6Q92537 303 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 KIFAP3Q92845 792 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 IFT74Q96LB3 600 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 KCNG1Q9UIX4 513 aa20.91■□□□□ 0.94
TMEM53-201ENST00000372235 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-201ENST00000372235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-201ENST00000372235 MEIS3P2A8K0S8 358 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 SLC11A1P49279 550 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 EFNA5P52803 228 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 PTGDRQ13258 359 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 CBX2Q14781 532 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-201ENST00000372235 MAPK6Q16659 721 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 AMHR2Q16671 573 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 POTEGQ6S5H5 508 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 DTHD1Q6ZMT9 781 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 C4orf32Q8N8J7 132 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 IGSF22Q8N9C0 903 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 DEPTORQ8TB45 409 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 ADPGKQ9BRR6 497 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 DPP7Q9UHL4 492 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 HCFC2Q9Y5Z7 792 aa20.9■□□□□ 0.94
TMEM53-201ENST00000372235 ARL5CA6NH57 179 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 LOC730098B7Z3J9 87 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 H3BQV1 296 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 N4BP3O15049 544 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 CLASP2O75122 1294 aaKnown RBP20.89■□□□□ 0.93
TMEM53-201ENST00000372235 POMCP01189 267 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 TMEM132AQ24JP5 1023 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 HERC4Q5GLZ8 1057 aaPredicted RBP20.89■□□□□ 0.93
TMEM53-201ENST00000372235 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 MAEAQ7L5Y9 396 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 ZNF280BQ86YH2 543 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 VN1R2Q8NFZ6 395 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 KHSRPQ92945 711 aaKnown RBP eCLIP20.89■□□□□ 0.93
TMEM53-201ENST00000372235 CPB2Q96IY4 423 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 EIF2AQ9BY44 585 aaKnown RBP20.89■□□□□ 0.93
TMEM53-201ENST00000372235 FZD8Q9H461 694 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 MRPL17Q9NRX2 175 aaKnown RBP20.89■□□□□ 0.93
TMEM53-201ENST00000372235 DNAJB4Q9UDY4 337 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 DNM3Q9UQ16 869 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 NR2E1Q9Y466 385 aa20.89■□□□□ 0.93
TMEM53-201ENST00000372235 NRP1O14786 923 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 MCTP1Q6DN14 999 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 RNF135Q8IUD6 432 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 SNX29Q8TEQ0 813 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 TMX3Q96JJ7 454 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 RIPOR3Q96MK2 946 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 RPS6KC1Q96S38 1066 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 COLEC11Q9BWP8 271 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 S1PR5Q9H228 398 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 ADAM7Q9H2U9 754 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 KIAA1024Q9UPX6 916 aa20.88■□□□□ 0.93
TMEM53-201ENST00000372235 ACKR2O00590 384 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 DDHD2O94830 711 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 MLH1P40692 756 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 MTHFRP42898 656 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 OR1G1P47890 313 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 GRIK3Q13003 919 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 PRPF4BQ13523 1007 aaKnown RBP20.87■□□□□ 0.93
TMEM53-201ENST00000372235 COLGALT2Q8IYK4 626 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 GAD1Q99259 594 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 TIPINQ9BVW5 301 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 BHMT2Q9H2M3 363 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 GPRC5CQ9NQ84 441 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 PCDHB6Q9Y5E3 794 aa20.87■□□□□ 0.93
TMEM53-201ENST00000372235 BDP1A6H8Y1 2624 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 A0A087WWV3 80 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 NPTXRO95502 500 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 C1RP00736 705 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 SOD2P04179 222 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 URODP06132 367 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 TOB1P50616 345 aaPredicted RBP20.86■□□□□ 0.93
TMEM53-201ENST00000372235 DSC1Q08554 894 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 SYCE2Q6PIF2 218 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 TMEM173Q86WV6 379 aaPredicted RBP20.86■□□□□ 0.93
TMEM53-201ENST00000372235 GPR65Q8IYL9 337 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 NT5C3AQ9H0P0 336 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 C17orf75Q9HAS0 396 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.86■□□□□ 0.93
TMEM53-201ENST00000372235 DDX19AQ9NUU7 478 aaKnown RBP20.86■□□□□ 0.93
TMEM53-201ENST00000372235 PARP2Q9UGN5 583 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 SMC3Q9UQE7 1217 aa20.86■□□□□ 0.93
TMEM53-201ENST00000372235 GJB2P29033 226 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 CREMQ03060 361 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms