RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CLP1Q92989 425 aaKnown RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ZNF689Q96CS4 500 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 CCDC51Q96ER9 411 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 CCDC43Q96MW1 224 aaKnown RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 PPP1R16BQ96T49 567 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ADAM2Q99965 735 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 PLVAPQ9BX97 442 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 GCOM2Q9BZD3 368 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 TMX1Q9H3N1 280 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ELAC1Q9H777 363 aaKnown RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 RGS18Q9NS28 235 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 HCN4Q9Y3Q4 1203 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 EVPLQ92817 2033 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 MYO7AQ13402 2215 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 FAM86C2PA6NEL3 165 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 EML1O00423 815 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 DTNBO60941 627 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 POLGP54098 1239 aaPredicted RBP11.42□□□□□ -0.58
COL5A1-202ENST00000371820 SPAG1Q07617 926 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 POSTNQ15063 836 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 NAALADL2Q58DX5 795 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 EARS2Q5JPH6 523 aaKnown RBP11.42□□□□□ -0.58
COL5A1-202ENST00000371820 ANO5Q75V66 913 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 RTN4RL1Q86UN2 441 aaPredicted RBP11.42□□□□□ -0.58
COL5A1-202ENST00000371820 TCP11Q8WWU5 503 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 GSDMAQ96QA5 445 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 LXNQ9BS40 222 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 ADAMTS10Q9H324 1103 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 CYP26B1Q9NR63 512 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 TMEM161AQ9NX61 479 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
COL5A1-202ENST00000371820 IGKV6-21A0A0C4DH24 114 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 C9IYK1 514 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 GRM6O15303 877 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 NCK2O43639 380 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 STBD1O95210 358 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 SKIP12755 728 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 DARSP14868 501 aaKnown RBP11.41□□□□□ -0.58
COL5A1-202ENST00000371820 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-202ENST00000371820 YWHABP31946 246 aaKnown RBP11.41□□□□□ -0.58
COL5A1-202ENST00000371820 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-202ENST00000371820 DMTNQ08495 405 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 CTC1Q2NKJ3 1217 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 KRT222Q8N1A0 295 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 RSPH1Q8WYR4 309 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 P2RX5Q93086 422 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 CLDND1Q9NY35 253 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 SUCLA2Q9P2R7 463 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-202ENST00000371820 PCDHA5Q9Y5H7 936 aa11.41□□□□□ -0.58
COL5A1-202ENST00000371820 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 ASAP2O43150 1006 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 LYPLA2O95372 231 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 MYL1P05976 194 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 MCM7P33993 719 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 LTBRP36941 435 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PPP1R2P41236 205 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 TXKP42681 527 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 ZP2Q05996 745 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 HYAL1Q12794 435 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 MORC3Q14149 939 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 DSC3Q14574 896 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 LONRF3Q496Y0 759 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 XKR9Q5GH70 373 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 SPOUT1Q5T280 376 aaKnown RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PLA2G4FQ68DD2 849 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 EP400NLQ6ZTU2 488 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 TPH2Q8IWU9 490 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 ABI1Q8IZP0 508 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PSPC1Q8WXF1 523 aaKnown RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 UBXN4Q92575 508 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PPP2R3CQ969Q6 453 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 DYDC2Q96IM9 177 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PPP1R13BQ96KQ4 1090 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PANX2Q96RD6 677 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 CEP89Q96ST8 783 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 EIF2AK1Q9BQI3 630 aaKnown RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 DHX33Q9H6R0 707 aaKnown RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 CHST12Q9NRB3 414 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 PRKAG3Q9UGI9 489 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 FAM50BQ9Y247 325 aa11.4□□□□□ -0.58
COL5A1-202ENST00000371820 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.58
COL5A1-202ENST00000371820 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 TMEM150BA6NC51 233 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms