RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PCIF1Q9H4Z3 704 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 SLCO1B3Q9NPD5 702 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 KCNQ5Q9NR82 932 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 A0A1B0GUL6 1792 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ABLIM1O14639 778 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 RIPK2O43353 540 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TJP3O95049 919 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 GDF11O95390 407 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 GCNT3O95395 438 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TDP2O95551 362 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 PCK1P35558 622 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 PLTPP55058 493 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 MOGSQ13724 837 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ZCWPW2Q504Y3 356 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF384Q8TF68 577 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 CKAP2Q8WWK9 683 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 SCG3Q8WXD2 468 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 DNAJC1Q96KC8 554 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 HAPLN3Q96S86 360 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 USTQ9Y2C2 406 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 MROH7Q68CQ1 1323 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 LAMB2P55268 1798 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 MAST2Q6P0Q8 1798 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 HNRNPRO43390 633 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 SESN3P58005 492 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 RPS6KA1Q15418 735 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 REXO1Q8N1G1 1221 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 TBK1Q9UHD2 729 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 GOLGA4Q13439 2230 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 CACNA1SQ13698 1873 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PGRMC1O00264 195 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 TBCAO75347 108 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 SERPING1P05155 500 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 ZCCHC18P0CG32 403 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 SERPINB4P48594 390 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 LSAMPQ13449 338 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 FAM118BQ9BPY3 351 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 SPATA16Q9BXB7 569 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 LUC7LQ9NQ29 371 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 E9PMD0 336 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 ECE2O60344 883 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 EEF2P13639 858 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 CALML3P27482 149 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 RCN2Q14257 317 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PARP6Q2NL67 630 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 RBBP8NLQ8NC74 664 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PCDHGB4Q9UN71 923 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 ARL2BPQ9Y2Y0 163 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 PNPLA7Q6ZV29 1317 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 RTL9Q8NET4 1388 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 UTRNP46939 3433 aa9.38□□□□□ -0.91
SMARCA1-203ENST00000371123 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 FGGP02679 453 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 CHKAP35790 457 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 SEPT2Q15019 361 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 MAN2A1Q16706 1144 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 GJB7Q6PEY0 223 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 TPTE2Q6XPS3 522 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 CCDC84Q86UT8 332 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 GPBP1Q86WP2 473 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 PNMA5Q96PV4 448 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 COG5Q9UP83 839 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 LY75O60449 1722 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RNASEH1O60930 286 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 GNAT2P19087 354 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 PDE6CP51160 858 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 LRRC23Q53EV4 343 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RNF111Q6ZNA4 994 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ERP27Q96DN0 273 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ERP44Q9BS26 406 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 CADM1Q9BY67 442 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RHBDL2Q9NX52 303 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 AIPL1Q9NZN9 384 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 TMEM221A6NGB7 291 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 BTNL10A8MVZ5 291 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms