RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
BRCC3-204ENST00000369462 FAM187BQ17R55 369 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 ZPBP2Q6X784 338 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 NOC3LQ8WTT2 800 aaKnown RBP11.97□□□□□ -0.49
BRCC3-204ENST00000369462 PRIMPOLQ96LW4 560 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 C11orf49Q9H6J7 331 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 HSPBP1Q9NZL4 362 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CLDN3O15551 220 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 EXOC3O60645 756 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 TOM1L1O75674 476 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CKBP12277 381 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CASP4P49662 377 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 TLE2Q04725 743 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 ATF7IP2Q5U623 682 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 NECAB2Q7Z6G3 386 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 RDH13Q8NBN7 331 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CPB2Q96IY4 423 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CEP63Q96MT8 703 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 DCDC2CA8MYV0 355 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 KCNJ18B7U540 433 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 TSPAN1O60635 241 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 AKAP3O75969 853 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ARF4P18085 180 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 KCNJ12Q14500 433 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 NFIL3Q16649 462 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ANKRD33Q7Z3H0 272 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 C12orf56Q8IXR9 622 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 SAAL1Q96ER3 474 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 CNOT6LQ96LI5 555 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 GOLGA8IPA6NC78 632 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 GOLGA8JA6NMD2 632 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 TLR3O15455 904 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 GARTP22102 1010 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 NCBP1Q09161 790 aaKnown RBP11.96□□□□□ -0.49
BRCC3-204ENST00000369462 MGAT3Q09327 533 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 XXYLT1Q8NBI6 393 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 OSBPL7Q9BZF2 842 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 FRMD4BQ9Y2L6 1034 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 STYXL1Q9Y6J8 313 aa11.96□□□□□ -0.49
BRCC3-204ENST00000369462 AP5Z1O43299 807 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 RPS6KA5O75582 802 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 SERPINC1P01008 464 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 NFX1Q12986 1120 aaKnown RBP11.96□□□□□ -0.5
BRCC3-204ENST00000369462 MYBPC2Q14324 1141 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 FAM114A1Q8IWE2 563 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.5
BRCC3-204ENST00000369462 TNFSF13BQ9Y275 285 aa11.96□□□□□ -0.5
BRCC3-204ENST00000369462 A0A0B4J269 797 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 CAND2O75155 1236 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 GHRP10912 638 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 CAPN2P17655 700 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 SPAG1Q07617 926 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 PCBP1Q15365 356 aaKnown RBP eCLIP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 ZNF568Q3ZCX4 644 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FAM228AQ86W67 206 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 TOX2Q96NM4 488 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 PTPRHQ9HD43 1115 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 A0A1B0GUA9 196 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 GNA14O95837 355 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 EEF1GP26641 437 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 PSMC2P35998 433 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 MTIF2P46199 727 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FANCCQ00597 558 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 BFSP2Q13515 415 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 KRT31Q15323 416 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 LRRC26Q2I0M4 334 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FBXO47Q5MNV8 452 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 MPZL3Q6UWV2 235 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FAM186BQ8IYM0 893 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 ANKRD20A12PQ8NF67 263 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 TMEM174Q8WUU8 243 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 FAM213AQ9BRX8 229 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms