RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RCAN3Q9UKA8 241 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PRDM4Q9UKN5 801 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 RNF112Q9ULX5 631 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PHTF1Q9UMS5 762 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 AP4E1Q9UPM8 1137 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TLR6Q9Y2C9 796 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PCDHB5Q9Y5E4 795 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ZZEF1O43149 2961 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 DOPEY1Q5JWR5 2465 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM43BA6NCK2 446 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FAM25EA8MYX2 175 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MINDY4BA8MYZ0 360 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 F6X3S4 739 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FOXN3O00409 490 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 APAF1O14727 1248 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SMAD7O15105 426 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TIAF1O95411 115 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TAL1P17542 331 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 HOXA10P31260 410 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TPD52P55327 224 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 BPIFB3P59826 476 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 CAMK2GQ13555 558 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TMEM67Q5HYA8 995 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 INTS11Q5TA45 600 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 RNF219Q5W0B1 726 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FAAH2Q6GMR7 532 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PLBD1Q6P4A8 553 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 C4orf50Q6ZRC1 276 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 OTOP3Q7RTS5 596 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FRMD5Q7Z6J6 570 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM42Q8IWZ5 723 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 IQCF2Q8IXL9 164 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SUPT20HQ8NEM7 779 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 USP33Q8TEY7 942 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 GIMAP1Q8WWP7 306 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ELMO3Q96BJ8 720 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM43Q96BQ3 446 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ZBTB10Q96DT7 871 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MTMR8Q96EF0 704 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 RBM17Q96I25 401 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 YIPF2Q9BWQ6 316 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SENP6Q9GZR1 1112 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ATXN3LQ9H3M9 355 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ATP6V0A4Q9HBG4 840 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 LUC7LQ9NQ29 371 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 DIAPH3Q9NSV4 1193 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 UTP6Q9NYH9 597 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PPARGC1AQ9UBK2 798 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SUN2Q9UH99 717 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PCDHA4Q9UN74 947 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PA2G4Q9UQ80 394 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MAPK8IP1Q9UQF2 711 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 DMTF1Q9Y222 760 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ATP11BQ9Y2G3 1177 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 HIF3AQ9Y2N7 669 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SUPT16HQ9Y5B9 1047 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MAGED1Q9Y5V3 778 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 A0A0G2JMZ2 1700 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 FRYQ5TBA9 3013 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SCN9AQ15858 1988 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM64A6NGJ6 449 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM64BA6NI03 449 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 GSG1L2A8MUP6 293 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 IRS4O14654 1257 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 TMPRSS2O15393 492 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SKAP2O75563 359 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 EYA4O95677 639 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PGRP06401 933 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 CAPN3P20807 821 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 EIF4A3P38919 411 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PREPP48147 710 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SH3BGRP55822 239 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 RTP1P59025 263 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SOX4Q06945 474 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SLMAPQ14BN4 828 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PSMD6Q15008 389 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SEPT7Q16181 437 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 HLFQ16534 295 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PPP2R5EQ16537 467 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PRR16Q569H4 304 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 ABRAXAS1Q6UWZ7 409 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 FAM186BQ8IYM0 893 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 UBR7Q8N806 425 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 LSMEM1Q8N8F7 131 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 C12orf50Q8NA57 414 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM63Q969Q1 353 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 HVCN1Q96D96 273 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 FAM46AQ96IP4 442 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 HIC2Q96JB3 615 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 MEGF10Q96KG7 1140 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 YIPF4Q9BSR8 244 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 ISCA1Q9BUE6 129 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PUS7LQ9H0K6 701 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 VPS33BQ9H267 617 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 PRKRIP1Q9H875 184 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 MAN1C1Q9NR34 630 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 BLOC1S4Q9NUP1 217 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 OGDHLQ9ULD0 1010 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms