RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 PPP1R13LQ8WUF5 828 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 BRI3BPQ8WY22 251 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ANKS1AQ92625 1134 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ADAMTS1Q9UHI8 967 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MAD2L2Q9UI95 211 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF148Q9UQR1 794 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 NDUFAB1O14561 156 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 TLL1O43897 1013 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 VIMP08670 466 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 PRR29P0C7W0 189 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 OR1G1P47890 313 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CFAP157Q5JU67 520 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 FBXO46Q6PJ61 603 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM72Q6ZMU5 477 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 TMC7Q7Z402 723 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 PALM2Q8IXS6 379 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 TMEM35BQ8NCS4 154 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ITIH6Q6UXX5 1313 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ARFGEF2Q9Y6D5 1785 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 KRT15P19012 456 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 DNAJB2P25686 324 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 IKBKEQ14164 716 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 UAP1Q16222 522 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 DNAJC21Q5F1R6 531 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 HAUS6Q7Z4H7 955 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 THEM5Q8N1Q8 247 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 VGLL2Q8N8G2 317 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 HVCN1Q96D96 273 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 POLR3CQ9BUI4 534 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 DONSONQ9NYP3 566 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CABYRO75952 493 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 HPDP32754 393 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 TCF7P36402 384 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MRPS9P82933 396 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MXRA7P84157 204 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ST3GAL1Q11201 340 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 IQCB1Q15051 598 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ACRBPQ8NEB7 543 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MKNK1Q9BUB5 465 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 SRRDQ9UH36 339 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 NKRFO15226 690 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ASAP2O43150 1006 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SP100P23497 879 aaPredicted RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 BZW1Q7L1Q6 419 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SCN4BQ8IWT1 228 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 FAM71BQ8TC56 605 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 TBC1D31Q96DN5 1066 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PAWRQ96IZ0 340 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 KRT12Q99456 494 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 MXRA8Q9BRK3 442 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ANKEF1Q9NU02 776 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SUCLA2Q9P2R7 463 aaPredicted RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 STRIP2Q9ULQ0 834 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PRG3Q9Y2Y8 225 aaPredicted RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 C10orf71Q711Q0 1435 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 AFDNP55196 1824 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 TYW5A2RUC4 315 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM49BA6NDI0 452 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 RRN3P2A6NIE6 340 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PP2D1A8MPX8 630 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PRRG1O14668 218 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SLC10A3P09131 477 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 MXD4Q14582 209 aaPredicted RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 OTOP2Q7RTS6 562 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ENGASEQ8NFI3 743 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 VPS37BQ9H9H4 285 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 C17orf75Q9HAS0 396 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 EIF3DO15371 548 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SLC16A4O15374 487 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 MAGEB2O15479 319 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 YWHABP31946 246 aaKnown RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SHMT1P34896 483 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 CNTN2Q02246 1040 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF568Q3ZCX4 644 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.53□□□□□ -1.2
RAB5B-201ENST00000360299 BBS5Q8N3I7 341 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 CCDC110Q8TBZ0 833 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 LRRC4Q9HBW1 653 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 PFDN6O15212 129 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 GUCY2DQ02846 1103 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SLC51AQ86UW1 340 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 ERICH1Q86X53 443 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 RNF149Q8NC42 400 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms