RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TCRBV7S3A2A0A539 114 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SMIM23A6NLE4 172 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 PPP1R12BO60237 982 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 ZEB2O60315 1214 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 C1QCP02747 245 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 CYP11B2P19099 503 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 UBXN1Q04323 297 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 PEX6Q13608 980 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SIX1Q15475 284 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 MEA1Q16626 185 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 TREML2Q5T2D2 321 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 PPP4R3AQ6IN85 833 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SLC39A4Q6P5W5 647 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SULF1Q8IWU6 871 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 ARFGAP1Q8N6T3 406 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 MB21D1Q8N884 522 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 MSANTD4Q8NCY6 345 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 ACVR1CQ8NER5 493 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 UBXN4Q92575 508 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 C18orf8Q96DM3 657 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 ALG13Q9NP73 1137 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 MIA3Q5JRA6 1907 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SYNRGQ9UMZ2 1314 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 C2orf16Q68DN1 1984 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 TDRD15B5MCY1 1934 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 A0A0U1RQS6 177 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 XRCC5P13010 732 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 ABCB4P21439 1286 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SCP2P22307 547 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 INPP5BP32019 993 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 PDE4CQ08493 712 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 MTFR1Q15390 333 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SND1Q7KZF4 910 aaKnown RBP eCLIP6.18□□□□□ -1.422e-7■■□□□ 12.4
CD47-201ENST00000355354 KLHL7Q8IXQ5 586 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 LRRC57Q8N9N7 239 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 METTL5Q9NRN9 209 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 CDC23Q9UJX2 597 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 DBR1Q9UK59 544 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 RRP15Q9Y3B9 282 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 APCP25054 2843 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 MSS51Q4VC12 460 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 ALKBH5Q6P6C2 394 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 EMID1Q96A84 441 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 GUCD1Q96NT3 240 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 HAUS4Q9H6D7 363 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 HDAC5Q9UQL6 1122 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 GOLGA8IPA6NC78 632 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 ANTXRLA6NF34 631 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 GOLGA8JA6NMD2 632 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 FOXN3O00409 490 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 CXCL11O14625 94 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 PALMO75781 387 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SCG2P13521 617 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 IVDP26440 423 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 GCAP28676 217 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 MSX2P35548 267 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 SEMA3FQ13275 785 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 E2F5Q15329 346 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 TRIP13Q15645 432 aaPredicted RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 FOXB2Q5VYV0 432 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 SRGAP1Q7Z6B7 1085 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 RALYLQ86SE5 291 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 SNX31Q8N9S9 440 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 CNOT6LQ96LI5 555 aaKnown RBP6.18□□□□□ -1.42
CD47-201ENST00000355354 KREMEN1Q96MU8 473 aa6.18□□□□□ -1.42
CD47-201ENST00000355354 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD47-201ENST00000355354 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 DSG3P32926 999 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 MRPS9P82933 396 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 AKAP17AQ02040 695 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 ZNF252P-AS1Q0IIN9 211 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 PFKFB3Q16875 520 aaPredicted RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 SPATA1Q5VX52 437 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 KBTBD2Q8IY47 623 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 ZNF516Q92618 1163 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 RABGGTAQ92696 567 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 MMP19Q99542 508 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 KLF6Q99612 283 aaPredicted RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 HES2Q9Y543 173 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CCDC189A1A4V9 331 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 FOXN2P32314 431 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 ATXN1P54253 815 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 RPL7AP62424 266 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 PITX1P78337 314 aaPredicted RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 OGDHQ02218 1023 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CTTNQ14247 550 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 EXOC3L4Q17RC7 722 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 SPTY2D1Q68D10 685 aaPredicted RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 PLA2G4FQ68DD2 849 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 ARHGEF19Q8IW93 802 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 AENQ8WTP8 325 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 ZKSCAN4Q969J2 545 aaPredicted RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 DDX20Q9UHI6 824 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms