RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 IFIT5Q13325 482 aaKnown RBP17.35■□□□□ 0.37
MBD1-204ENST00000347968 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 ZDHHC14Q8IZN3 488 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
MBD1-204ENST00000347968 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
MBD1-204ENST00000347968 MAPK13O15264 365 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
MBD1-204ENST00000347968 ZCWPW2Q504Y3 356 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 CEP70Q8NHQ1 597 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 NAT14Q8WUY8 206 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 NPHS2Q9NP85 383 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 ZFP69BQ9UJL9 534 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 STXBP5LQ9Y2K9 1186 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 SLC4A7Q9Y6M7 1214 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 PASKQ96RG2 1323 aa17.35■□□□□ 0.37
MBD1-204ENST00000347968 DDX3XO00571 662 aaKnown RBP eCLIP17.34■□□□□ 0.372e-8■■■■□ 25.7
MBD1-204ENST00000347968 H2AFZP0C0S5 128 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 SPTY2D1Q68D10 685 aaPredicted RBP17.34■□□□□ 0.37
MBD1-204ENST00000347968 H2AFVQ71UI9 128 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 CES2O00748 559 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 ZNF24P17028 368 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 PAX3P23760 479 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 RRP1BQ14684 758 aaKnown RBP17.34■□□□□ 0.37
MBD1-204ENST00000347968 IRF2BP2Q7Z5L9 587 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
MBD1-204ENST00000347968 CENPKQ9BS16 269 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 SUCLA2Q9P2R7 463 aaPredicted RBP17.34■□□□□ 0.37
MBD1-204ENST00000347968 PLCH1Q4KWH8 1693 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 A0A1W2PRG0 241 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 GALCP54803 685 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 TNFAIP8L3Q5GJ75 292 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 CAPN12Q6ZSI9 719 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 MAP7D3Q8IWC1 876 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 CCDC105Q8IYK2 499 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
MBD1-204ENST00000347968 MCUR1Q96AQ8 359 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 HES6Q96HZ4 224 aa17.34■□□□□ 0.37
MBD1-204ENST00000347968 SPATA31A5Q5VU36 1347 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 SPATA31A7Q8IWB4 1347 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 C2orf71A6NGG8 1288 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 TXKP42681 527 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 TMED2Q15363 201 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 CPNE8Q86YQ8 564 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 KRT35Q92764 455 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 INPP5DQ92835 1189 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 MAGEB18Q96M61 343 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 ARL8BQ9NVJ2 186 aa17.33■□□□□ 0.37
MBD1-204ENST00000347968 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 CCNT1O60563 726 aaKnown RBP17.33■□□□□ 0.36
MBD1-204ENST00000347968 ALX1Q15699 326 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 HP1BP3Q5SSJ5 553 aaPredicted RBP17.33■□□□□ 0.36
MBD1-204ENST00000347968 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 HAPLN3Q96S86 360 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 SMC6Q96SB8 1091 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 CCSER1Q9C0I3 900 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 IQCGQ9H095 443 aaKnown RBP17.33■□□□□ 0.36
MBD1-204ENST00000347968 ZHX3Q9H4I2 956 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 USP40Q9NVE5 1235 aa17.33■□□□□ 0.36
MBD1-204ENST00000347968 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.36
MBD1-204ENST00000347968 HARSP12081 509 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 PTPN4P29074 926 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 HPCAP84074 193 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 MTMR2Q13614 643 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 MARK2Q7KZI7 788 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 GJA10Q969M2 543 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 GREM2Q9H772 168 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 NID2Q14112 1375 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 DDX3YO15523 660 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 GNAT2P19087 354 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 PTGIRP43119 386 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 CDK7P50613 346 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 AP1B1Q10567 949 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 CCDC137Q6PK04 289 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 HEATR3Q7Z4Q2 680 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 GLYCTKQ8IVS8 523 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 SCUBE1Q8IWY4 988 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 HAUS1Q96CS2 278 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 ALG13Q9NP73 1137 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 CNOT7Q9UIV1 285 aaKnown RBP17.32■□□□□ 0.36
MBD1-204ENST00000347968 RASAL2Q9UJF2 1139 aa17.32■□□□□ 0.36
MBD1-204ENST00000347968 ZNF180Q9UJW8 692 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms