RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 APEX2Q9UBZ4 518 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
SLIT3-201ENST00000332966 KIF20BQ96Q89 1820 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 PJA2O43164 708 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 ZBED4O75132 1171 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 SLC1A1P43005 524 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 NPEPPSP55786 919 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 KPNB1Q14974 876 aaKnown RBP16.92■□□□□ 0.3
SLIT3-201ENST00000332966 MREGQ8N565 214 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 RNF25Q96BH1 459 aaPredicted RBP16.92■□□□□ 0.3
SLIT3-201ENST00000332966 HAUS8Q9BT25 410 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 MID2Q9UJV3 735 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
SLIT3-201ENST00000332966 GOLGA8IPA6NC78 632 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 GOLGA8JA6NMD2 632 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 HNRNPCP07910 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
SLIT3-201ENST00000332966 ABCD1P33897 745 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 ABCB5Q2M3G0 1257 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 C9orf72Q96LT7 481 aa16.92■□□□□ 0.3
SLIT3-201ENST00000332966 CFLARO15519 480 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 TMEM191BP0C7N4 346 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 MYBL2P10244 700 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 MX2P20592 715 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 ELF3P78545 371 aaPredicted RBP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 HIC1Q14526 733 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 TSSK1BQ9BXA7 367 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 ZNF233A6NK53 670 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 SBK1Q52WX2 424 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 HP1BP3Q5SSJ5 553 aaPredicted RBP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 CRELD2Q6UXH1 353 aaPredicted RBP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 RFX8Q6ZV50 586 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 EPS8L3Q8TE67 593 aaKnown RBP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 DCLRE1BQ9H816 532 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 ANLNQ9NQW6 1124 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 GOLGA8MH3BSY2 632 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 CLDN3O15551 220 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 SKAP2O75563 359 aaPredicted RBP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 GNAT1P11488 350 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 FNTAP49354 379 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
SLIT3-201ENST00000332966 ERVK-9P63128 1117 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
SLIT3-201ENST00000332966 CEP170BQ9Y4F5 1589 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 COILP38432 576 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 DAGLBQ8NCG7 672 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 PDZD8Q8NEN9 1154 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 MAGEB18Q96M61 343 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 MTO1Q9Y2Z2 717 aaKnown RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 SLIT1O75093 1534 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 CHD1O14646 1710 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 FMO5P49326 533 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 PMS1P54277 932 aaKnown RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 UBXN2AP68543 259 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 RABGAP1LQ5R372 815 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 SYDE2Q5VT97 1194 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 NUDCD3Q8IVD9 361 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 DEPDC1BQ8WUY9 529 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 SEMA6BQ9H3T3 888 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 CNOT7Q9UIV1 285 aaKnown RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 BMP3P12645 472 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 TARSP26639 723 aaKnown RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 PDZD4Q76G19 769 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 TMC3Q7Z5M5 1100 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 PACSIN1Q9BY11 444 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 FAM53CQ9NYF3 392 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
SLIT3-201ENST00000332966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.9■□□□□ 0.3
SLIT3-201ENST00000332966 COMTP21964 271 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
SLIT3-201ENST00000332966 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 TTC16Q8NEE8 873 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 FBXO25Q8TCJ0 367 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 TATDN2Q93075 761 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 NSL1Q96IY1 281 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 L3MBTL1Q9Y468 752 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 EMSYQ7Z589 1322 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 hCG_2014768A0A024R1R8 64 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 A0A087X0B3 334 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 KITP10721 976 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 ATP6V0A1Q93050 837 aa16.89■□□□□ 0.29
SLIT3-201ENST00000332966 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms