RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 RAPGEF1Q13905 1077 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 P3H1Q32P28 736 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 MREGQ8N565 214 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 ANKS4BQ8N8V4 417 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 CIDEBQ9UHD4 219 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 SUGT1Q9Y2Z0 365 aa18.39■□□□□ 0.53
PRKCD-201ENST00000330452 hCG_2014768A0A024R1R8 64 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 KRT38O76015 456 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 ATP11AP98196 1134 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 FOXR2Q6PJQ5 311 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 ZNF572Q7Z3I7 529 aaPredicted RBP18.38■□□□□ 0.53
PRKCD-201ENST00000330452 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRKCD-201ENST00000330452 CARD9Q9H257 536 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 RBM12Q9NTZ6 932 aaKnown RBP18.38■□□□□ 0.53
PRKCD-201ENST00000330452 CNOT8Q9UFF9 292 aaKnown RBP18.38■□□□□ 0.53
PRKCD-201ENST00000330452 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 SYNPO2Q9UMS6 1093 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 TCP10L2B9ZVM9 353 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 SERPING1P05155 500 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 MCL1Q07820 350 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 PRR16Q569H4 304 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 ZNF280DQ6N043 979 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 FAM133AQ8N9E0 248 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
PRKCD-201ENST00000330452 HIP1RO75146 1068 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 GNA14O95837 355 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 FTCDO95954 541 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 RARAP10276 462 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 HOXD12P35452 270 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 MSH2P43246 934 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 HDAC4P56524 1084 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ITIH3Q06033 890 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 NCSTNQ92542 709 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 PTPRN2Q92932 1015 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 NKX1-2Q9UD57 310 aaPredicted RBP18.37■□□□□ 0.53
PRKCD-201ENST00000330452 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 MEIS2O14770 477 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 PALMO75781 387 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ACTN1P12814 892 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ACADSP16219 412 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 KLRC1P26715 233 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 SLC12A3P55017 1021 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ITIH4Q14624 930 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 TRPM8Q7Z2W7 1104 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 UCMAQ8WVF2 138 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ADAMTS1Q9UHI8 967 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 NFU1Q9UMS0 254 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 PACSIN2Q9UNF0 486 aaPredicted RBP18.37■□□□□ 0.53
PRKCD-201ENST00000330452 STK38LQ9Y2H1 464 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 SH3GLB1Q9Y371 365 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
PRKCD-201ENST00000330452 A0A087X0T9 212 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 FAM228BP0C875 321 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 PAFAH1B1P43034 410 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 CHMP6Q96FZ7 201 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 SCOCQ9UIL1 159 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 PLAAQ9Y263 795 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 HARSP12081 509 aaKnown RBP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 DPEP1P16444 411 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 SERPINB4P48594 390 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 PEX5P50542 639 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 USP11P51784 963 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 PPP2R2AP63151 447 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 KCNH2Q12809 1159 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 USH1GQ495M9 461 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 PODNQ7Z5L7 613 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 FAM136AQ96C01 138 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 INIPQ9NRY2 104 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 HNRNPCP07910 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 NR2F2P24468 414 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 EPS15P42566 896 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 SF3A3Q12874 501 aaKnown RBP eCLIP18.36■□□□□ 0.539e-6■■□□□ 12.4
PRKCD-201ENST00000330452 RRP1BQ14684 758 aaKnown RBP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 IRGCQ6NXR0 463 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 KIF2BQ8N4N8 673 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
PRKCD-201ENST00000330452 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 SLC4A7Q9Y6M7 1214 aa18.36■□□□□ 0.53
PRKCD-201ENST00000330452 LRRC37AA6NMS7 1700 aa18.35■□□□□ 0.53
PRKCD-201ENST00000330452 SPATA31D3P0C874 917 aa18.35■□□□□ 0.53
PRKCD-201ENST00000330452 MARSP56192 900 aaKnown RBP18.35■□□□□ 0.53
PRKCD-201ENST00000330452 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
PRKCD-201ENST00000330452 SPIRE1Q08AE8 756 aa18.35■□□□□ 0.53
PRKCD-201ENST00000330452 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
PRKCD-201ENST00000330452 CERKLQ49MI3 558 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms