RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NOP9Q86U38 636 aaKnown RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CBWD2Q8IUF1 395 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 ACCSQ96QU6 501 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 GOLGA6L10A0A0M3HER8 536 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 TLDC2A0PJX2 215 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 ADRB2P07550 413 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 CHRNB2P17787 502 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
CSDC2-201ENST00000306149 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
CSDC2-201ENST00000306149 PLCB4Q15147 1175 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 QPCTQ16769 361 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 C6orf89Q6UWU4 347 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 ZDHHC18Q9NUE0 388 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 ZNF536O15090 1300 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 TRAPPC3O43617 180 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 CAND2O75155 1236 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 MUTP22033 750 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 SOX10P56693 466 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 GPC5P78333 572 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 CETN1Q12798 172 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 DRP2Q13474 957 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 RHOT2Q8IXI1 618 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 PRELID2Q8N945 189 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 KREMEN1Q96MU8 473 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 ZNF341Q9BYN7 854 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
CSDC2-201ENST00000306149 ANKRD63C9JTQ0 380 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 MMEP08473 750 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 PLS3P13797 630 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 MXI1P50539 228 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 TTC27Q6P3X3 843 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 RSBN1LQ6PCB5 846 aaPredicted RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 EPB41L4BQ9H329 900 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 TMEM206Q9H813 350 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 TOPORSQ9NS56 1045 aaPredicted RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 ATP9AO75110 1047 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 PYGMP11217 842 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 QARSP47897 775 aaKnown RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 KCNJ1P48048 391 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 FAM102BQ5T8I3 360 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 ZDHHC24Q6UX98 284 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 EPS8L1Q8TE68 723 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 YY1AP1Q9H869 796 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
CSDC2-201ENST00000306149 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
CSDC2-201ENST00000306149 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 PPFIA2O75334 1257 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 HSD17B4P51659 736 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 MTMR1Q13613 665 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 PPP2R5EQ16537 467 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 CABS1Q96KC9 395 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 NAP1L3Q99457 506 aaPredicted RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 ZSWIM1Q9BR11 485 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 TXLNGYQ9BZA5 131 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 AGO4Q9HCK5 861 aaKnown RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 RPL21P46778 160 aaKnown RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 ACTN3Q08043 901 aaPredicted RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
CSDC2-201ENST00000306149 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
CSDC2-201ENST00000306149 PHF20L1A8MW92 1017 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 H0YHG0 523 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 ICAM1P05362 532 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 ADSSP30520 456 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PTGER2P43116 358 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PTGIRP43119 386 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PMS2P54278 862 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 EIF3BP55884 814 aaKnown RBP16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PHLDB2Q86SQ0 1253 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 UBL4BQ8N7F7 174 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
CSDC2-201ENST00000306149 C5orf60A6NFR6 353 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PLSCR1O15162 318 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 RTN2O75298 545 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms