RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 WDR18Q9BV38 432 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 SYNCQ9H7C4 482 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 PCDHA10Q9Y5I2 948 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 SLURP2P0DP57 97 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 TAL1P17542 331 aaPredicted RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 PLCB3Q01970 1234 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 TRPC3Q13507 836 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 COG2Q14746 738 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 C11orf63Q6NUN7 778 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 JAMLQ86YT9 394 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 GIMAP7Q8NHV1 300 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 FAM129AQ9BZQ8 928 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 RAB20Q9NX57 234 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 ANKRD65E5RJM6 399 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 TGFB1I1O43294 461 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 FAM153BP0C7A2 387 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 GZMAP12544 262 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 SNRNP35Q16560 246 aaKnown RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 PTGISQ16647 500 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 TKFCQ3LXA3 575 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 FAM153CQ494X1 144 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 SLFN12LQ6IEE8 588 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 DCUN1D2Q6PH85 259 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 GPD1LQ8N335 351 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 C3orf20Q8ND61 904 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 ZNF473Q8WTR7 871 aaKnown RBP10.79□□□□□ -0.68
HMGCR-201ENST00000287936 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 SH3GL2Q99962 352 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 TMEM8AQ9HCN3 771 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 RNF146Q9NTX7 359 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 FAM153AQ9UHL3 310 aa10.79□□□□□ -0.68
HMGCR-201ENST00000287936 BTAF1O14981 1849 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 CYP26A1O43174 497 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 THAP12O43422 761 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 CAV1Q03135 178 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 KCNA1Q09470 495 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 BYSLQ13895 437 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 AGBL3Q8NEM8 1001 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 SCFD2Q8WU76 684 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 ANAPC7Q9UJX3 599 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 ZNRF3Q9ULT6 936 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PCDHB4Q9Y5E5 795 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 KIAA0391O15091 583 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PLSCR1O15162 318 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PLA2G6O60733 806 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 LDHAP00338 332 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PPARDQ03181 441 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 SPIRE1Q08AE8 756 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 FKBP1CQ5VVH2 108 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 UHMK1Q8TAS1 419 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 SAAL1Q96ER3 474 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 CCT8L2Q96SF2 557 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PLCD4Q9BRC7 762 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 NRBP2Q9NSY0 501 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 FBXO28Q9NVF7 368 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PCDHAC2Q9Y5I4 1007 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 GJA3Q9Y6H8 435 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 LRRIQ4A6NIV6 560 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 MEFVO15553 781 aaPredicted RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 POLD1P28340 1107 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PTENP60484 403 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 KIF22Q14807 665 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 PCNX4Q63HM2 1172 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 FAM83AQ86UY5 434 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 NSUN6Q8TEA1 469 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 P3H4Q92791 437 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 ZSWIM1Q9BR11 485 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 CELF4Q9BZC1 486 aaKnown RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 C17orf75Q9HAS0 396 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 OSGEPQ9NPF4 335 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 ZNF277Q9NRM2 450 aaPredicted RBP10.78□□□□□ -0.68
HMGCR-201ENST00000287936 SCINQ9Y6U3 715 aa10.78□□□□□ -0.68
HMGCR-201ENST00000287936 DRP2Q13474 957 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 SPDYE2Q495Y8 402 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 TTMPQ5BVD1 217 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 SPDYCQ5MJ68 293 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 SH3BP5LQ7L8J4 393 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 GABBR1Q9UBS5 961 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 GTF3C4Q9UKN8 822 aa10.77□□□□□ -0.68
HMGCR-201ENST00000287936 COMTP21964 271 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 JAM2P57087 298 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 TRIM72Q6ZMU5 477 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 C4orf19Q8IY42 314 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 LNX1Q8TBB1 728 aaPredicted RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 CCHCR1Q8TD31 782 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 DNAI2Q9GZS0 605 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 TMEM39BQ9GZU3 492 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 AZI2Q9H6S1 392 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 AGO4Q9HCK5 861 aaKnown RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 MAPK13O15264 365 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 MAFGO15525 162 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 FAM107AO95990 144 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms