RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KLHL8Q9P2G9 620 aaPredicted RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 PMLP29590 882 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 FOXO4P98177 505 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 EXOC8Q8IYI6 725 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 EDEM3Q9BZQ6 932 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 ZNF609O15014 1411 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CHN1P15882 459 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 YWHAHQ04917 246 aaPredicted RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 SLC18A3Q16572 532 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 NUDCD3Q8IVD9 361 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CCNYL1Q8N7R7 359 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 PRPF38AQ8NAV1 312 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CCDC124Q96CT7 223 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 SSTR3P32745 418 aaPredicted RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CDC26Q8NHZ8 85 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 SLC26A7Q8TE54 656 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CPSF3Q9UKF6 684 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 AXIN2Q9Y2T1 843 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 CALB1P05937 261 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 ZNF341Q9BYN7 854 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 WARS2Q9UGM6 360 aaKnown RBP17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 PSMD14O00487 310 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 DNAJC6O75061 913 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 GYPCP04921 128 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 GNAT1P11488 350 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 OCA2Q04671 838 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 ZBTB41Q5SVQ8 909 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 FBXL13Q8NEE6 735 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 GTSE1Q9NYZ3 720 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 STK4Q13043 487 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 RWDD4Q6NW29 188 aaKnown RBP17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 RHOT1Q8IXI2 618 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 TFR2Q9UP52 801 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 TRAF3IP3Q9Y228 551 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 UTYO14607 1347 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 ABCB11O95342 1321 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 GOLGA8RI6L899 631 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 AGTP01019 485 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 COPS2P61201 443 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 KRT39Q6A163 491 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 MIEF2Q96C03 454 aa17.47■□□□□ 0.39
SH3RF1-201ENST00000284637 UBE4BO95155 1302 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 NBPF20Q3BBV1 942 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ACAD11Q709F0 780 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ICA1LQ8NDH6 482 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 RMDN2Q96LZ7 410 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ETAA1Q9NY74 926 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 PDP2Q9P2J9 529 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 TULP2O00295 520 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 SERPINB3P29508 390 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 GNA15P30679 374 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ZNF699Q32M78 642 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ADGRF4Q8IZF3 695 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ATP11CQ8NB49 1132 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ZC4H2Q9NQZ6 224 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ASNSD1Q9NWL6 643 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 DBR1Q9UK59 544 aaKnown RBP17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 NEO1Q92859 1461 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 CHEK2O96017 543 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 CARSP49589 748 aaKnown RBP17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 TMED10P49755 219 aaKnown RBP17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 MED21Q13503 144 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ARMCX2Q7L311 632 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 METTL23Q86XA0 190 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 UBN1Q9NPG3 1134 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ABCF3Q9NUQ8 709 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
SH3RF1-201ENST00000284637 MAN1A2O60476 641 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 MCF2P10911 925 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 JAK3P52333 1124 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 KIRREL3Q8IZU9 778 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 DTX3LQ8TDB6 740 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 SLC9A2Q9UBY0 812 aa17.46■□□□□ 0.38
SH3RF1-201ENST00000284637 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 LONRF1Q17RB8 773 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 RASSF3Q86WH2 238 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 RNF103-CHMP3A0A140T963 221 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 KPNA7A9QM74 516 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms