RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ZMYND10O75800 440 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 WDR78Q5VTH9 848 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 ZNF516Q92618 1163 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 HVCN1Q96D96 273 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 EXOC7Q9UPT5 735 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 PLA2G4AP47712 749 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 SNRPFP62306 86 aaKnown RBP25.1■■□□□ 1.61
RAB40B-201ENST00000269347 CYP24A1Q07973 514 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 FAM213AQ9BRX8 229 aa25.1■■□□□ 1.61
RAB40B-201ENST00000269347 SCN4AP35499 1836 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 PTPRJQ12913 1337 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 CALCAP01258 141 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 STAT5BP51692 787 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 GALCP54803 685 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 MKRN4PQ13434 485 aaPredicted RBP25.09■■□□□ 1.61
RAB40B-201ENST00000269347 BMS1Q14692 1282 aaKnown RBP25.09■■□□□ 1.61
RAB40B-201ENST00000269347 MEI1Q5TIA1 1274 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 LRRC57Q8N9N7 239 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 SLC17A8Q8NDX2 589 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 ABCB6Q9NP58 842 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 ARGLU1Q9NWB6 273 aaPredicted RBP25.09■■□□□ 1.61
RAB40B-201ENST00000269347 HYOU1Q9Y4L1 999 aa25.09■■□□□ 1.61
RAB40B-201ENST00000269347 ZBTB42B2RXF5 422 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 NLRP11P59045 1033 aaKnown RBP25.08■■□□□ 1.61
RAB40B-201ENST00000269347 KIF22Q14807 665 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 GJC2Q5T442 439 aaPredicted RBP25.08■■□□□ 1.61
RAB40B-201ENST00000269347 METTL7BQ6UX53 244 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 HDAC7Q8WUI4 952 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 MMP19Q99542 508 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 PI4K2AQ9BTU6 479 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 OSGEPQ9NPF4 335 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 DLATP10515 647 aaKnown RBP25.08■■□□□ 1.61
RAB40B-201ENST00000269347 PRLRP16471 622 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 ERVK-9P63128 1117 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 BEND6Q5SZJ8 279 aaPredicted RBP25.08■■□□□ 1.61
RAB40B-201ENST00000269347 CRELD2Q6UXH1 353 aaPredicted RBP25.08■■□□□ 1.61
RAB40B-201ENST00000269347 CAGE1Q8TC20 777 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 TATDN2Q93075 761 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 ARHGEF26Q96DR7 871 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 GPR20Q99678 358 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 FUT8Q9BYC5 575 aa25.08■■□□□ 1.61
RAB40B-201ENST00000269347 BTNL10A8MVZ5 291 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 SLC25A27O95847 323 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 ZBTB48P10074 688 aaPredicted RBP25.07■■□□□ 1.6
RAB40B-201ENST00000269347 CAPSQ13938 189 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 LONRF2Q1L5Z9 754 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 SEZ6Q53EL9 994 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 BRDTQ58F21 947 aaPredicted RBP25.07■■□□□ 1.6
RAB40B-201ENST00000269347 HELQQ8TDG4 1101 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 BICD1Q96G01 975 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 IFT74Q96LB3 600 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 LRRIQ4A6NIV6 560 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 SGPL1O95470 568 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 ACOT2P49753 483 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 KCTD19Q17RG1 926 aaPredicted RBP25.07■■□□□ 1.6
RAB40B-201ENST00000269347 SV2AQ7L0J3 742 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 ARMC9Q7Z3E5 817 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 GPD1LQ8N335 351 aa25.07■■□□□ 1.6
RAB40B-201ENST00000269347 DHX38Q92620 1227 aaKnown RBP25.07■■□□□ 1.6
RAB40B-201ENST00000269347 PLXNA1Q9UIW2 1896 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 CCDC151A5D8V7 595 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 P4HA2O15460 535 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 MYBL2P10244 700 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 NEDD9Q14511 834 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 CCDC62Q6P9F0 684 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.06■■□□□ 1.6
RAB40B-201ENST00000269347 KRT222Q8N1A0 295 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 AFAP1L1Q8TED9 768 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 TRAPPC12Q8WVT3 735 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 SEPT1Q8WYJ6 367 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 PCDHB18PQ96TA0 734 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 TARS2Q9BW92 718 aaKnown RBP25.06■■□□□ 1.6
RAB40B-201ENST00000269347 COQ4Q9Y3A0 265 aa25.06■■□□□ 1.6
RAB40B-201ENST00000269347 CHRNB2P17787 502 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 ZNF572Q7Z3I7 529 aaPredicted RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 SPATA4Q8NEY3 305 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 TPCN2Q8NHX9 752 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 ZNF668Q96K58 619 aaPredicted RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 EVPLQ92817 2033 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 GJB1P08034 283 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 H2AFZP0C0S5 128 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 ABCB4P21439 1286 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 MATR3P43243 847 aaKnown RBP eCLIP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 RNASE9P60153 205 aaKnown RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 CELF3Q5SZQ8 465 aaKnown RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 KRT39Q6A163 491 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 H2AFVQ71UI9 128 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 FASTKD5Q7L8L6 764 aaKnown RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 GSPT2Q8IYD1 628 aaKnown RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 PPM1KQ8N3J5 372 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 MS4A4AQ96JQ5 239 aa25.05■■□□□ 1.6
RAB40B-201ENST00000269347 CHORDC1Q9UHD1 332 aaPredicted RBP25.05■■□□□ 1.6
RAB40B-201ENST00000269347 PMM2O15305 246 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 N4BP1O75113 896 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 TGFB3P10600 412 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 OSBPP22059 807 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 GARTP22102 1010 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 NOP2P46087 812 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 PRPF4BQ13523 1007 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 KCTD2Q14681 263 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms