RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CRKP46108 304 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■■□□ 18.9
SPG7-201ENST00000268704 PPP2R5AQ15172 486 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 SPDYCQ5MJ68 293 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 PNMA8AQ86V59 439 aaPredicted RBP18.36■□□□□ 0.53
SPG7-201ENST00000268704 SH2D3AQ9BRG2 576 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 MKNK1Q9BUB5 465 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 LTBP1Q14766 1721 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 MGRN1O60291 552 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 ACSL3O95573 720 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 CHRNA3P32297 505 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 NF2P35240 595 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 AUHQ13825 339 aaKnown RBP18.36■□□□□ 0.53
SPG7-201ENST00000268704 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 NSMFQ6X4W1 530 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 TRMT1LQ7Z2T5 733 aaKnown RBP18.36■□□□□ 0.53
SPG7-201ENST00000268704 UBL4BQ8N7F7 174 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 PKD2L1Q9P0L9 805 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 CTNNAL1Q9UBT7 734 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
SPG7-201ENST00000268704 RASGRF2O14827 1237 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 SGPL1O95470 568 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 ATP6V1G2O95670 118 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
SPG7-201ENST00000268704 GHRP10912 638 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 CTNNA2P26232 953 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 ACCSLQ4AC99 568 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 RHOT2Q8IXI1 618 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 DBNDD1Q9H9R9 158 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 SAMD15Q9P1V8 674 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 SLC12A4Q9UP95 1085 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 HGSO14964 777 aaPredicted RBP18.35■□□□□ 0.53
SPG7-201ENST00000268704 RPSAP08865 295 aaKnown RBP18.35■□□□□ 0.53
SPG7-201ENST00000268704 ELF1P32519 619 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 PEX5P50542 639 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 SLC15A2Q16348 729 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 TAX1BP1Q86VP1 789 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 NOD2Q9HC29 1040 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 FAM198AQ9UFP1 575 aa18.35■□□□□ 0.53
SPG7-201ENST00000268704 PSMD10O75832 226 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 RARAP10276 462 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 DLATP10515 647 aaKnown RBP18.34■□□□□ 0.53
SPG7-201ENST00000268704 ADCY2Q08462 1091 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 PPP2R5EQ16537 467 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 MTRF1LQ9UGC7 380 aaKnown RBP18.34■□□□□ 0.53
SPG7-201ENST00000268704 PCYOX1Q9UHG3 505 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 ASAP2O43150 1006 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 AGTP01019 485 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 DRG2P55039 364 aaKnown RBP18.34■□□□□ 0.53
SPG7-201ENST00000268704 SNX1Q13596 522 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 CNGA2Q16280 664 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 C6orf118Q5T5N4 469 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 TRPM8Q7Z2W7 1104 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 DAW1Q8N136 415 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 CBWD1Q9BRT8 395 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 PFASO15067 1338 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 A0A1W2PRG0 241 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 GAS7O60861 476 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 HIP1RO75146 1068 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 GPC5P78333 572 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 NOP9Q86U38 636 aaKnown RBP18.34■□□□□ 0.53
SPG7-201ENST00000268704 EXOC3L1Q86VI1 746 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 CCDC63Q8NA47 563 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 FGFR1OP2Q9NVK5 253 aa18.34■□□□□ 0.53
SPG7-201ENST00000268704 RBBP6Q7Z6E9 1792 aaKnown RBP18.33■□□□□ 0.53
SPG7-201ENST00000268704 K7ENM7 598 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 GH2P01242 217 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 CALCAP01258 141 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 COILP38432 576 aaPredicted RBP18.33■□□□□ 0.53
SPG7-201ENST00000268704 ADCY1Q08828 1119 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 CCDC174Q6PII3 467 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 SLC47A2Q86VL8 602 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 COL23A1Q86Y22 540 aaPredicted RBP18.33■□□□□ 0.53
SPG7-201ENST00000268704 C1orf54Q8WWF1 131 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 UNC45AQ9H3U1 944 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 TUFT1Q9NNX1 390 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.53
SPG7-201ENST00000268704 G3V3G9 751 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 SPOPO43791 374 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 UBOX5O94941 541 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 ARP10275 920 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 BCRP11274 1271 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 BMP3P12645 472 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
SPG7-201ENST00000268704 KCNJ2P63252 427 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 RRP1BQ14684 758 aaKnown RBP18.33■□□□□ 0.52
SPG7-201ENST00000268704 QSER1Q2KHR3 1735 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 P3H4Q92791 437 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.524e-7■■■□□ 16.6
SPG7-201ENST00000268704 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.52
SPG7-201ENST00000268704 MIF4GDA9UHW6 222 aaKnown RBP18.32■□□□□ 0.52
SPG7-201ENST00000268704 CHRNB2P17787 502 aa18.32■□□□□ 0.52
SPG7-201ENST00000268704 ZNF131P52739 623 aa18.32■□□□□ 0.52
SPG7-201ENST00000268704 SIX1Q15475 284 aaPredicted RBP18.32■□□□□ 0.52
SPG7-201ENST00000268704 TRIP13Q15645 432 aaPredicted RBP18.32■□□□□ 0.52
SPG7-201ENST00000268704 NFIL3Q16649 462 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms