RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 PASKQ96RG2 1323 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 GCNT3O95395 438 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 BRAFP15056 766 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 VSIG1Q86XK7 387 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 PALB2Q86YC2 1186 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
XRCC1-201ENST00000262887 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 MAGEB18Q96M61 343 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 CRAMP1Q96RY5 1269 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 CTTNBP2NLQ9P2B4 639 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 CTNNAL1Q9UBT7 734 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 MEIS1O00470 390 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 TUBP50607 506 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 MPP2Q14168 576 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
XRCC1-201ENST00000262887 FAM182BQ5T319 152 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 TRIM74Q86UV6 250 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 TRIM73Q86UV7 250 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 ZSWIM1Q9BR11 485 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 SYT11Q9BT88 431 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
XRCC1-201ENST00000262887 FOXO6A8MYZ6 492 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 GGPS1O95749 300 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 TTLL1O95922 423 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 PEX5P50542 639 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 PPP4CP60510 307 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 PSMC6P62333 389 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 SETDB1Q15047 1291 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 SGSM1Q2NKQ1 1148 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 ZNF568Q3ZCX4 644 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 SYT15Q9BQS2 421 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 CNGA1P29973 690 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 COILP38432 576 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-201ENST00000262887 KCNJ1P48048 391 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 GCLCP48506 637 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-201ENST00000262887 GRIK5Q16478 980 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 TSNAXIP1Q2TAA8 658 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 C11orf63Q6NUN7 778 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 ARHGEF18Q6ZSZ5 1173 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 FAM186BQ8IYM0 893 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 GALNT15Q8N3T1 639 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
XRCC1-201ENST00000262887 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ACADSP16219 412 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 KLC1Q07866 573 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 KCNA1Q09470 495 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 CATSPER3Q86XQ3 398 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.166e-7■■■■■ 139.2
XRCC1-201ENST00000262887 FAM13CQ8NE31 585 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 PITPNM3Q9BZ71 974 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 NKIRAS1Q9NYS0 192 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 DNM3Q9UQ16 869 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ASB3Q9Y575 518 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 PYGLP06737 847 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 LMNB2Q03252 620 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ARHGAP44Q17R89 818 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 TMEM154Q6P9G4 183 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ENDOVQ8N8Q3 282 aaKnown RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 TMEM237Q96Q45 408 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 TCRBV7S2A1N4TA0A589 114 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 MYBL1P10243 752 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 GM2AP17900 193 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ALDH3A1P30838 453 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ITPK1Q13572 414 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 LAMB3Q13751 1172 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 SYT2Q8N9I0 419 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 EZH1Q92800 747 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-201ENST00000262887 INPP5DQ92835 1189 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 ERP27Q96DN0 273 aa16.04■□□□□ 0.16
XRCC1-201ENST00000262887 DDX60LQ5H9U9 1706 aaKnown RBP16.03■□□□□ 0.16
XRCC1-201ENST00000262887 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 SLC26A4O43511 780 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 LRRN2O75325 713 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 ECEL1O95672 775 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 EYA4O95677 639 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 LDHCP07864 332 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 PYGMP11217 842 aa16.03■□□□□ 0.16
XRCC1-201ENST00000262887 TARSP26639 723 aaKnown RBP16.03■□□□□ 0.16
XRCC1-201ENST00000262887 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms