RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 KCNA3P22001 575 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 PCK1P35558 622 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 RAD23BP54727 409 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 DCAF17Q5H9S7 520 aaPredicted RBP19■□□□□ 0.63
CDKN1B-201ENST00000228872 TTC27Q6P3X3 843 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 GLYCTKQ8IVS8 523 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 CERS5Q8N5B7 392 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 TTLL6Q8N841 843 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 RUNDC3BQ96NL0 473 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 PCYOX1Q9UHG3 505 aa19■□□□□ 0.63
CDKN1B-201ENST00000228872 IRF6O14896 467 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 ALAS1P13196 640 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 PARP6Q2NL67 630 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 GPBP1Q86WP2 473 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 TEKT4Q8WW24 435 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 CTNNBL1Q8WYA6 563 aaPredicted RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 ARHGEF26Q96DR7 871 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 TXLNGQ9NUQ3 528 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 GOLGB1Q14789 3259 aaKnown RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 ANKRD63C9JTQ0 380 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 MKRN3Q13064 507 aaKnown RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 USP17L2Q6R6M4 530 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 APLFQ8IW19 511 aaPredicted RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 STK32AQ8WU08 396 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 TGS1Q96RS0 853 aaKnown RBP18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 KCNK9Q9NPC2 374 aa18.99■□□□□ 0.63
CDKN1B-201ENST00000228872 PDHA1P08559 390 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 PLA2G4BP0C869 781 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 TPBGLP0DKB5 382 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 LMNB1P20700 586 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 PIGOQ8TEQ8 1089 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ART4Q93070 314 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 GJA10Q969M2 543 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 DDX23Q9BUQ8 820 aaKnown RBP18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 GCNT4Q9P109 453 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 GH1P01241 217 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 HSPA6P17066 643 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 STAT1P42224 750 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 CASP5P51878 434 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ACVR2BQ13705 512 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 MPP2Q14168 576 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 SGSM1Q2NKQ1 1148 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ZNF568Q3ZCX4 644 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 HYIQ5T013 277 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 CCDC25Q86WR0 208 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 SERPINB12Q96P63 405 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 SYT15Q9BQS2 421 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 LRMDAQ9H2I8 198 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 DBNDD1Q9H9R9 158 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 TRAF3IP3Q9Y228 551 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ASB3Q9Y575 518 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
CDKN1B-201ENST00000228872 ECE2O60344 883 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 RTN3O95197 1032 aaPredicted RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 DPEP1P16444 411 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 CYP11B2P19099 503 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 CTNNA2P26232 953 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 GCLCP48506 637 aaPredicted RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 RHBDL3P58872 404 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 STRIP1Q5VSL9 837 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 TCERG1LQ5VWI1 586 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 TRMT10CQ7L0Y3 403 aaKnown RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 ZDHHC14Q8IZN3 488 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 HAS1Q92839 578 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 ZHX3Q9H4I2 956 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 DAGLAQ9Y4D2 1042 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 MYBL1P10243 752 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 GM2AP17900 193 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 PEX5P50542 639 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 SLC5A9Q2M3M2 681 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 AGGF1Q8N302 714 aaeCLIP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 GALNT15Q8N3T1 639 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 CDC42EP4Q9H3Q1 356 aaKnown RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 PIDD1Q9HB75 910 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 KIAA1024Q9UPX6 916 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 PITPNM2Q9BZ72 1349 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 FAM170AA1A519 330 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 FOXO6A8MYZ6 492 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 AKAP3O75969 853 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 ATP5DP30049 168 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 ADCY7P51828 1080 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 TGFB2P61812 414 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 RNASELQ05823 741 aaKnown RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 RRP1BQ14684 758 aaKnown RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 MTFR1Q15390 333 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 CCDC137Q6PK04 289 aaKnown RBP18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 NT5C3AQ9H0P0 336 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 MYLK2Q9H1R3 596 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 TAOK3Q9H2K8 898 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 USP40Q9NVE5 1235 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 COG5Q9UP83 839 aa18.97■□□□□ 0.63
CDKN1B-201ENST00000228872 KDM3AQ9Y4C1 1321 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms