RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 COL3A1P02461 1466 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 PPFIA4O75335 1185 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 PRKCBP05771 671 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 MESDQ14696 234 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 KCNB1Q14721 858 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 VEPH1Q14D04 833 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SKIV2LQ15477 1246 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 DCAF4L1Q3SXM0 396 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 TTBK2Q6IQ55 1244 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 C1orf228Q6PIY5 440 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 LRRC31Q6UY01 552 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 FAM83AQ86UY5 434 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 TRIM42Q8IWZ5 723 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 THNSL1Q8IYQ7 743 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 TMEM35BQ8NCS4 154 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 FAM149B1Q96BN6 582 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 NHEJ1Q9H9Q4 299 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 GBA2Q9HCG7 927 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 ESYT2A0FGR8 921 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 POTEB3A0JP26 581 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 C17orf102A2RUQ5 167 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 GOLGA8IPA6NC78 632 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 GOLGA8JA6NMD2 632 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 E9PMD0 336 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SGK1O00141 431 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 EBAG9O00559 213 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 HBP1O60381 514 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CD4P01730 458 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SATB1Q01826 763 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CCDC62Q6P9F0 684 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 DARS2Q6PI48 645 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 POTEBQ6S5H4 581 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CCDC13Q8IYE1 715 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CNPY4Q8N129 248 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SRBD1Q8N5C6 995 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 EFHBQ8N7U6 833 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 FAM133AQ8N9E0 248 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RBM41Q96IZ5 413 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 LRRC4CQ9HCJ2 640 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 DDX56Q9NY93 547 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 ZMYM5Q9UJ78 669 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 PCDHA13Q9Y5I0 950 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SYNGAP1Q96PV0 1343 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 SETD1BQ9UPS6 1966 aaKnown RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 POTEMA6NI47 508 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 HIP1RO75146 1068 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 ECEL1O95672 775 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PLS3P13797 630 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 THOC5Q13769 683 aaKnown RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 BAATQ14032 418 aaPredicted RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 ZNF484Q5JVG2 852 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 KAZNQ674X7 775 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 CWF19L1Q69YN2 538 aaKnown RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 TTC13Q8NBP0 860 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 ADAM32Q8TC27 787 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 SCFD2Q8WU76 684 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 GLMNQ92990 594 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 INTS2Q9H0H0 1204 aaKnown RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 AAASQ9NRG9 546 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 ANKEF1Q9NU02 776 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 POLLQ9UGP5 575 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 HPCAL4Q9UM19 191 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 SYNPO2Q9UMS6 1093 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 AFG3L2Q9Y4W6 797 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 GOLGA8SH3BPF8 625 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 SNAP23O00161 211 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PDXKO00764 312 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 RGS16O15492 202 aaPredicted RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 GGPS1O95749 300 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PDHBP11177 359 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PAMP19021 973 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 CD58P19256 250 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PSMA2P25787 234 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 TPD52P55327 224 aaPredicted RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 BSPRYQ5W0U4 402 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 MOXD1Q6UVY6 613 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 SCARA5Q6ZMJ2 495 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 PCGF5Q86SE9 256 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 YAF2Q8IY57 180 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 IGDCC4Q8TDY8 1250 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 TNIP3Q96KP6 325 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 FAM213AQ9BRX8 229 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 DNAJC12Q9UKB3 198 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 STAP1Q9ULZ2 295 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 INPP5FQ9Y2H2 1132 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 POTECB2RU33 542 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 CXCL11O14625 94 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 EIF3DO15371 548 aaKnown RBP eCLIP4.54□□□□□ -1.68
CFTR-201ENST00000003084 TTI1O43156 1089 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 RGS9O75916 674 aaPredicted RBP4.54□□□□□ -1.68
CFTR-201ENST00000003084 APOL3O95236 402 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 CPP00450 1065 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 IFNB1P01574 187 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 NR3C2P08235 984 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 STAG3L1P0CL83 205 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 TROVE2P10155 538 aaKnown RBP eCLIP4.54□□□□□ -1.68
CFTR-201ENST00000003084 RAC2P15153 192 aa4.54□□□□□ -1.68
CFTR-201ENST00000003084 CTAGE3PQ8IX95 158 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms