RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 C2orf16Q68DN1 1984 aa10.97□□□□□ -0.65
PHGDH-212ENST00000641247 A0A087WZ62 844 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 TGM5O43548 720 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 EDIL3O43854 480 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 ZNF623O75123 536 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 POMCP01189 267 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 ALDH2P05091 517 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 TDGF1P13385 188 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 SREBF1P36956 1147 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 RNASELQ05823 741 aaKnown RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 GSE1Q14687 1217 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 UGCGQ16739 394 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 TWF2Q6IBS0 349 aaKnown RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 GLB1LQ6UWU2 654 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 KSR1Q8IVT5 923 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 SH2D3AQ9BRG2 576 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 FDXACB1Q9BRP7 624 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 RIC8AQ9NPQ8 531 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 MIOSQ9NXC5 875 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 FAN1Q9Y2M0 1017 aa10.96□□□□□ -0.65
PHGDH-212ENST00000641247 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-212ENST00000641247 CHD8Q9HCK8 2581 aa10.96□□□□□ -0.66
PHGDH-212ENST00000641247 TMEM150BA6NC51 233 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 GAS2O43903 313 aaKnown RBP10.95□□□□□ -0.66
PHGDH-212ENST00000641247 TBC1D4O60343 1298 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 GLUD1P00367 558 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 PMLP29590 882 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 TARBP2Q15633 366 aaKnown RBP10.95□□□□□ -0.66
PHGDH-212ENST00000641247 N4BP2L1Q5TBK1 243 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-212ENST00000641247 CYP26C1Q6V0L0 522 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 TMTC3Q6ZXV5 915 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 CLDN23Q96B33 292 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 SHDQ96IW2 340 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 PIDD1Q9HB75 910 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-212ENST00000641247 CEP131Q9UPN4 1083 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 PCDHA10Q9Y5I2 948 aa10.95□□□□□ -0.66
PHGDH-212ENST00000641247 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-212ENST00000641247 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 CDC45O75419 566 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 STBD1O95210 358 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 OATP04181 439 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 URODP06132 367 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 RPL17P18621 184 aaKnown RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 TMOD1P28289 359 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 HOXC13P31276 330 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 ZNF76P36508 570 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 GNAQP50148 359 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 DSG1Q02413 1049 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 PRKCQQ04759 706 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 MTAPQ13126 283 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 UBXN11Q5T124 520 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 JAKMIP3Q5VZ66 844 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 ZNF746Q6NUN9 644 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 NIPA1Q7RTP0 329 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 GRASPQ7Z6J2 395 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 MRPL10Q7Z7H8 261 aaKnown RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 RALYLQ86SE5 291 aaKnown RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 COLGALT2Q8IYK4 626 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 TMEM175Q9BSA9 504 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 ZNF577Q9BSK1 485 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 OSBPL6Q9BZF3 934 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 PLA2G2FQ9BZM2 168 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 PRMT8Q9NR22 394 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 CHST7Q9NS84 486 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
PHGDH-212ENST00000641247 PCDHB2Q9Y5E7 798 aa10.94□□□□□ -0.66
PHGDH-212ENST00000641247 IGKV6-21A0A0C4DH24 114 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 SMCO2A6NFE2 343 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 HIP1O00291 1037 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-212ENST00000641247 ADH1AP07327 375 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 PSAPP07602 524 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 FSHRP23945 695 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 FUT2Q10981 343 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 SART3Q15020 963 aaKnown RBP10.93□□□□□ -0.66
PHGDH-212ENST00000641247 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 HDAC7Q8WUI4 952 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 FGF13Q92913 245 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
PHGDH-212ENST00000641247 GJA10Q969M2 543 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 LENG9Q96B70 501 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms