RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 STAM2O75886 525 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 CYP11B2P19099 503 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 HSPA9P38646 679 aaKnown RBP19.12■□□□□ 0.65
PCF11-207ENST00000624931 GFPT1Q06210 699 aaPredicted RBP19.12■□□□□ 0.65
PCF11-207ENST00000624931 GNPTABQ3T906 1256 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 FBXO16Q8IX29 292 aaPredicted RBP19.12■□□□□ 0.65
PCF11-207ENST00000624931 OTUD6BQ8N6M0 293 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 ZBTB9Q96C00 473 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 BHMT2Q9H2M3 363 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 EPB41L5Q9HCM4 733 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 DNM3Q9UQ16 869 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 STK24Q9Y6E0 443 aa19.12■□□□□ 0.65
PCF11-207ENST00000624931 MEFVO15553 781 aaPredicted RBP19.11■□□□□ 0.65
PCF11-207ENST00000624931 FSBPO95073 299 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 UBA1P22314 1058 aaKnown RBP19.11■□□□□ 0.65
PCF11-207ENST00000624931 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 CCDC40Q4G0X9 1142 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 CNPY4Q8N129 248 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 LRRC45Q96CN5 670 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 DNAJC19Q96DA6 116 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ATP6V1G3Q96LB4 118 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 RUSC1Q9BVN2 902 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 PALMO75781 387 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ARIH2O95376 493 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 MYBP10242 640 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 CXCR5P32302 372 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ICAM3P32942 547 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 KRT76Q01546 638 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 GUCY2DQ02846 1103 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 PLCB4Q15147 1175 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ZNF792Q3KQV3 632 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 ZCWPW2Q504Y3 356 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 EEF2KMTQ96G04 330 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 CALR3Q96L12 384 aaKnown RBP19.11■□□□□ 0.65
PCF11-207ENST00000624931 ISCUQ9H1K1 167 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 POLD4Q9HCU8 107 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 SALL4Q9UJQ4 1053 aa19.11■□□□□ 0.65
PCF11-207ENST00000624931 TMEM150BA6NC51 233 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 WDR64B1ANS9 1081 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 NCK2O43639 380 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 EYA4O95677 639 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 GLI1P08151 1106 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 NR1D1P20393 614 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 LSP1P33241 339 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 CYFIP1Q7L576 1253 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 CCDC91Q7Z6B0 441 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 CCDC65Q8IXS2 484 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 SYT2Q8N9I0 419 aaPredicted RBP19.1■□□□□ 0.65
PCF11-207ENST00000624931 CDHR1Q96JP9 859 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 JPH1Q9HDC5 661 aaPredicted RBP19.1■□□□□ 0.65
PCF11-207ENST00000624931 TCEAL9Q9UHQ7 104 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 NFU1Q9UMS0 254 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 IVNS1ABPQ9Y6Y0 642 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 WDR81Q562E7 1941 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 NFASCO94856 1347 aa19.1■□□□□ 0.65
PCF11-207ENST00000624931 MAFGO15525 162 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 BUB1O43683 1085 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 AOC2O75106 756 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 PPP1R37O75864 691 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 CARSP49589 748 aaKnown RBP19.09■□□□□ 0.65
PCF11-207ENST00000624931 LIG3P49916 1009 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 JAK3P52333 1124 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 CRHR2Q13324 411 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 RUFY4Q6ZNE9 571 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 TRMT1LQ7Z2T5 733 aaKnown RBP19.09■□□□□ 0.65
PCF11-207ENST00000624931 PLEKHH3Q7Z736 793 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 RPAINQ86UA6 219 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 ZC3H3Q8IXZ2 948 aaKnown RBP19.09■□□□□ 0.65
PCF11-207ENST00000624931 USP38Q8NB14 1042 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 GLIS3Q8NEA6 775 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 GEMIN8Q9NWZ8 242 aaKnown RBP19.09■□□□□ 0.65
PCF11-207ENST00000624931 TMEM59LQ9UK28 342 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCF11-207ENST00000624931 ZSWIM8A7E2V4 1837 aa19.09■□□□□ 0.65
PCF11-207ENST00000624931 ZNF233A6NK53 670 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 P4HBP07237 508 aaKnown RBP19.08■□□□□ 0.65
PCF11-207ENST00000624931 MDH1P40925 334 aaKnown RBP19.08■□□□□ 0.65
PCF11-207ENST00000624931 ACTR2P61160 394 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 COASYQ13057 564 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 PDCLQ13371 301 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 BIRC3Q13489 604 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 MTMR3Q13615 1198 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 GRB14Q14449 540 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 ASIC2Q16515 512 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 LY6KQ17RY6 165 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 FAM26FQ5R3K3 315 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 ZNF746Q6NUN9 644 aaPredicted RBP19.08■□□□□ 0.65
PCF11-207ENST00000624931 ARMCX2Q7L311 632 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 TRIM59Q8IWR1 403 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 NEK9Q8TD19 979 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 LMBR1Q8WVP7 490 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 SH2D3AQ9BRG2 576 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 LSM14BQ9BX40 385 aaKnown RBP19.08■□□□□ 0.65
PCF11-207ENST00000624931 FGFBP2Q9BYJ0 223 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 PDGFCQ9NRA1 345 aa19.08■□□□□ 0.65
PCF11-207ENST00000624931 SLC9A2Q9UBY0 812 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms