RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 C4orf19Q8IY42 314 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 C12orf76Q8N812 135 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 NAP1L4Q99733 375 aaKnown RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 ZBP1Q9H171 429 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 DNAJB4Q9UDY4 337 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-221ENST00000619555 DDHD2O94830 711 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 SLITRK3O94933 977 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 CTSAP10619 480 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 KRT2P35908 639 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.41
TARDBP-221ENST00000619555 EMC2Q15006 297 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 IER5LQ5T953 404 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 OTUD6AQ7L8S5 288 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 MRPL10Q7Z7H8 261 aaKnown RBP12.46□□□□□ -0.41
TARDBP-221ENST00000619555 DDX53Q86TM3 631 aaKnown RBP12.46□□□□□ -0.41
TARDBP-221ENST00000619555 FERMT3Q86UX7 667 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 RNF149Q8NC42 400 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 WASF1Q92558 559 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 TNFRSF25Q93038 417 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 PGBD4Q96DM1 585 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 KCNH6Q9H252 994 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 POMKQ9H5K3 350 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 PPME1Q9Y570 386 aa12.46□□□□□ -0.41
TARDBP-221ENST00000619555 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
TARDBP-221ENST00000619555 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
TARDBP-221ENST00000619555 EPCAMP16422 314 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 FOSBP53539 338 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 RARS2Q5T160 578 aaKnown RBP12.45□□□□□ -0.42
TARDBP-221ENST00000619555 CES5AQ6NT32 575 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 SLFN12Q8IYM2 578 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 TMEM87AQ8NBN3 555 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 SLC22A17Q8WUG5 538 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 TCP11Q8WWU5 503 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 RSPH1Q8WYR4 309 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 RSAD1Q9HA92 442 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 XPNPEP1Q9NQW7 623 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
TARDBP-221ENST00000619555 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 A0A087WWV3 80 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 C2CD4DB7Z1M9 353 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 WNT7AO00755 349 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 ASAP2O43150 1006 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 JAK2O60674 1132 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 POMCP01189 267 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 SSBP05455 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
TARDBP-221ENST00000619555 ITIH3Q06033 890 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 FBXL6Q8N531 539 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
TARDBP-221ENST00000619555 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
TARDBP-221ENST00000619555 PRSS33Q8NF86 280 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 URGCPQ8TCY9 931 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 GTF3C6Q969F1 213 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 NECTIN4Q96NY8 510 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 MTRQ99707 1265 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 HSD17B14Q9BPX1 270 aa12.44□□□□□ -0.42
TARDBP-221ENST00000619555 EIF2AK1Q9BQI3 630 aaKnown RBP12.44□□□□□ -0.42
TARDBP-221ENST00000619555 EIF2AQ9BY44 585 aaKnown RBP12.44□□□□□ -0.42
TARDBP-221ENST00000619555 CNTNAP2Q9UHC6 1331 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 BTBD18B2RXH4 712 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 TSPAN1O60635 241 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 ALDH2P05091 517 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 ITGA4P13612 1032 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 NCLP19338 710 aaKnown RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 TXKP42681 527 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 MTHFRP42898 656 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 MRE11P49959 708 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 PTENP60484 403 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 GIT2Q14161 759 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 CALCRLQ16602 461 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 SUGP1Q8IWZ8 645 aaKnown RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 KREMEN2Q8NCW0 462 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 CPB2Q96IY4 423 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 FAM193BQ96PV7 902 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 TMEM175Q9BSA9 504 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
TARDBP-221ENST00000619555 BRMS1Q9HCU9 246 aa12.43□□□□□ -0.42
TARDBP-221ENST00000619555 DZANK1Q9NVP4 752 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms