RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 RNF149Q8NC42 400 aa13.35□□□□□ -0.27
TNFAIP3-206ENST00000612899 ELAC2Q9BQ52 826 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-206ENST00000612899 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 THOC5Q13769 683 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 HP1BP3Q5SSJ5 553 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 TC2NQ8N9U0 490 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 HUS1O60921 280 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 SNCBQ16143 134 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 ARL13BQ3SXY8 428 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 RAD9BQ6WBX8 426 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 MLXIPLQ9NP71 852 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 PDS5AQ29RF7 1337 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 M0QYV0 167 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 ZNF185O15231 689 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 STAT5BP51692 787 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 ATP6V1E2Q96A05 226 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 DIP2AQ14689 1571 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 TADA3O75528 432 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 SDC4P31431 198 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 VSNL1P62760 191 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 FAM47EQ6ZV65 393 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 PDCD7Q8N8D1 485 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 ZNF70Q9UC06 446 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 TRIM10Q9UDY6 481 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 STRIP2Q9ULQ0 834 aa13.34□□□□□ -0.27
TNFAIP3-206ENST00000612899 RASA4BC9J798 803 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 CHUKO15111 745 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 RASA4O43374 803 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 MMEP08473 750 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 ARL4CP56559 192 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 MAGOHP61326 146 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 ZNF449Q6P9G9 518 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 ASNSD1Q9NWL6 643 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 EVI5O60447 810 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 NR3C2P08235 984 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 UCHL3P15374 230 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 ACOT2P49753 483 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 SLC18A3Q16572 532 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 TADA2BQ86TJ2 420 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 KLC2Q9H0B6 622 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 PIK3C2BO00750 1634 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 PFDN1O60925 122 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 MYBP10242 640 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 BZW1Q7L1Q6 419 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 TTC13Q8NBP0 860 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 C1orf54Q8WWF1 131 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 TTC17Q96AE7 1141 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 NUDCD1Q96RS6 583 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-206ENST00000612899 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 KRT37O76014 449 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 CCDC137Q6PK04 289 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 MMP19Q99542 508 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 KLHL8Q9P2G9 620 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 BNIP3LO60238 219 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 SLC9A1P19634 815 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 XPAP23025 273 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 TXNRD3Q86VQ6 643 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 SCN4BQ8IWT1 228 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 BEST2Q8NFU1 509 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 LPAR1Q92633 364 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 AGPAT1Q99943 283 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 TBX3O15119 743 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 DGAT1O75907 488 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 GGPS1O95749 300 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 MAP7Q14244 749 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
TNFAIP3-206ENST00000612899 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms