RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TMEM265A0A087WTH1 108 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 A0A1B0GVL5 298 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 MYMKA6NI61 221 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 K7ERI5 159 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 SLC16A4O15374 487 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 SKIP12755 728 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 PFKFB1P16118 471 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 ARF4P18085 180 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 RAB27AP51159 221 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 FAM189BP81408 668 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 HTRA4P83105 476 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 AMHR2Q16671 573 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 FAM187BQ17R55 369 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 PPP2R2DQ66LE6 453 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 PPP4R3CPQ6ZMV5 832 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 RNF169Q8NCN4 708 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 SPIRE2Q8WWL2 714 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 DDX12PQ92771 950 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 CCDC51Q96ER9 411 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 LRRC27Q9C0I9 530 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 CCDC113Q9H0I3 377 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 TNMDQ9H2S6 317 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 FZD8Q9H461 694 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 ELAC1Q9H777 363 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 FAM105AQ9NUU6 356 aa21.67■■□□□ 1.06
SHKBP1-214ENST00000597396 KIAA1671Q9BY89 1806 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 A0A0U1RQF3 1178 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 LCHNA4D1U4 455 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 GOLGA6L4A6NEF3 574 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 B4GALT5O43286 388 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 HOXA11P31270 313 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 AMPD3Q01432 767 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 PRPF4BQ13523 1007 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 CEP57L1Q8IYX8 460 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 FSIP1Q8NA03 581 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 MYLIPQ8WY64 445 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 STAMQ92783 540 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 MAGEF1Q9HAY2 307 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 ARHGAP28Q9P2N2 729 aa21.66■■□□□ 1.06
SHKBP1-214ENST00000597396 CNTNAP2Q9UHC6 1331 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 A0A1W2PQ27 194 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 A0A1W2PQ64 194 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 A0A1W2PQD8 194 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 H0YCG3 227 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 ACKR2O00590 384 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 DGKIO75912 1065 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 ZNF131P52739 623 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 CSPP1Q1MSJ5 1256 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 MAFAQ8NHW3 353 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 MRPS27Q92552 414 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 NTPCRQ9BSD7 190 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 TRAIPQ9BWF2 469 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 ZNF576Q9H609 170 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 TMEM134Q9H6X4 195 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 CUL9Q8IWT3 2517 aa21.65■■□□□ 1.06
SHKBP1-214ENST00000597396 COL4A6Q14031 1691 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 N4BP3O15049 544 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 HOXA2O43364 376 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 EOMESO95936 686 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 IDEP14735 1019 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 STRN3Q13033 797 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 PAN2Q504Q3 1202 aaKnown RBP21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 CRIPAKQ8N1N5 446 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 DNAJC19Q96DA6 116 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 TRIM6Q9C030 488 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 KBTBD4Q9NVX7 518 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 SERTAD1Q9UHV2 236 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 PCDHB2Q9Y5E7 798 aa21.64■■□□□ 1.05
SHKBP1-214ENST00000597396 TDRD15B5MCY1 1934 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 K7ENM7 598 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 TRAK2O60296 914 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 FOSL2P15408 326 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 GAP43P17677 238 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 SYKP43405 635 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 GATMP50440 423 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 NCKAP1LP55160 1127 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 BTG3Q14201 252 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 UBXN11Q5T124 520 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 CDR2LQ86X02 465 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 FAM178BQ8IXR5 827 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 ABI1Q8IZP0 508 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 FIBCD1Q8N539 461 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 TMEM161BQ8NDZ6 487 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 SP7Q8TDD2 431 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 ZNF689Q96CS4 500 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 PGBD4Q96DM1 585 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 USP25Q9UHP3 1055 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 HPSEQ9Y251 543 aa21.63■■□□□ 1.05
SHKBP1-214ENST00000597396 A0A0C4DFX4 3053 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 A0A1B0GUA9 196 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 LINC01553A4QN01 128 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 TBKBP1A7MCY6 615 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ZNF623O75123 536 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ARHGEF15O94989 841 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 NPTXRO95502 500 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 EDN1P05305 212 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 FGFR1P11362 822 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms