RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PHLDB3Q6NSJ2 640 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 TPH2Q8IWU9 490 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 ATXN2LQ8WWM7 1075 aaKnown RBP13.36□□□□□ -0.27
PDE4A-207ENST00000590407 CD101Q93033 1021 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
PDE4A-207ENST00000590407 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 TAS2R14Q9NYV8 317 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
PDE4A-207ENST00000590407 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 PLA2G6O60733 806 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 GAS7O60861 476 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 CYP2J2P51589 502 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 PRPF4BQ13523 1007 aaKnown RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 COG2Q14746 738 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 CCDC197Q8NCU1 140 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SLCO2A1Q92959 643 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ROPN1BQ9BZX4 212 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ROPN1Q9HAT0 212 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 DNM1LO00429 736 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 RAD21O60216 631 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ONECUT3O60422 494 aaPredicted RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 EXOC3O60645 756 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
PDE4A-207ENST00000590407 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 RARGP13631 454 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SCTRP47872 440 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SNAP25P60880 206 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 FBXO25Q8TCJ0 367 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 GLG1Q92896 1179 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 RIT2Q99578 217 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 TAOK3Q9H2K8 898 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 USP21Q9UK80 565 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
PDE4A-207ENST00000590407 CCT8L1PA6NM43 557 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 FTLP02792 175 aaPredicted RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 SHBGP04278 402 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 CYP1A2P05177 515 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 STAT2P52630 851 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 PLTPP55058 493 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 PREPLQ4J6C6 727 aaPredicted RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 RBM26Q5T8P6 1007 aaKnown RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 DAW1Q8N136 415 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 ANKS4BQ8N8V4 417 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 ART4Q93070 314 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 MYCBPQ99417 103 aaPredicted RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 TEKT3Q9BXF9 490 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 TRIM31Q9BZY9 425 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 IKZF4Q9H2S9 585 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
PDE4A-207ENST00000590407 CTTNBP2NLQ9P2B4 639 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 MTUS1Q9ULD2 1270 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 SNX24Q9Y343 169 aa13.34□□□□□ -0.27
PDE4A-207ENST00000590407 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 G3V3G9 751 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 RGS16O15492 202 aaPredicted RBP13.33□□□□□ -0.28
PDE4A-207ENST00000590407 PPIP5K2O43314 1243 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 CTNND1O60716 968 aaKnown RBP13.33□□□□□ -0.28
PDE4A-207ENST00000590407 TOM1O60784 492 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 MMEP08473 750 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 CHN1P15882 459 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 RPL21P46778 160 aaKnown RBP13.33□□□□□ -0.28
PDE4A-207ENST00000590407 VAMP7P51809 220 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 TCP10Q12799 353 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 WLSQ5T9L3 541 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 CYB5D1Q6P9G0 228 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 TRMT10CQ7L0Y3 403 aaKnown RBP13.33□□□□□ -0.28
PDE4A-207ENST00000590407 NIPA1Q7RTP0 329 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 UNC45AQ9H3U1 944 aa13.33□□□□□ -0.28
PDE4A-207ENST00000590407 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms