RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SLC40A1Q9NP59 571 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 TRMT1Q9NXH9 659 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 TBC1D7Q9P0N9 293 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 CLEC1BQ9P126 229 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 RABL2BQ9UNT1 228 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 FRMD3A2A2Y4 597 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 LRRD1A4D1F6 860 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 GOLGA6L4A6NEF3 574 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 M0R2C6 588 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 DLX3O60479 287 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 SMIM24O75264 130 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 SKAP2O75563 359 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TMCC1O94876 653 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 FARP2O94887 1054 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 MPOP05164 745 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 PARP1P09874 1014 aaKnown RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC159P0C7I6 412 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 MSL3P1P0C860 447 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ALDH3A1P30838 453 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 PHEXP78562 749 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CASP8Q14790 479 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 NR1I3Q14994 352 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 SF1Q15637 639 aaKnown RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 WHAMMP3Q1A5X7 153 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 OGFOD2Q6N063 350 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CYB5D1Q6P9G0 228 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 PRR23BQ6ZRT6 265 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 DPH6Q7L8W6 267 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TMC6Q7Z403 805 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TMEM110Q86TL2 294 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC103Q8IW40 242 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 PEX5LQ8IYB4 626 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ANKRD13AQ8IZ07 590 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 FBXO15Q8NCQ5 510 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 BCAS4Q8TDM0 211 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 RSPH1Q8WYR4 309 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 OSBP2Q969R2 916 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TBC1D31Q96DN5 1066 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 DHTKD1Q96HY7 919 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 JAKMIP1Q96N16 626 aaKnown RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ZFYVE21Q9BQ24 234 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 LNPKQ9C0E8 428 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 YIPF3Q9GZM5 350 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 NUP62CLQ9H1M0 184 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 BHMT2Q9H2M3 363 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 EPB41L4BQ9H329 900 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 DDX19AQ9NUU7 478 aaKnown RBP6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TUBGCP4Q9UGJ1 667 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ZNF148Q9UQR1 794 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ITM2BQ9Y287 266 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 C15orf41Q9Y2V0 281 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 PIK3C2GO75747 1445 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 TTC21BQ7Z4L5 1316 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CDHR2Q9BYE9 1310 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 ERCC6Q03468 1493 aa6.72□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC163A0A0D9SF12 145 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 A0A1W2PQ27 194 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 A0A1W2PQ64 194 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 A0A1W2PQC6 194 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 A0A1W2PQD8 194 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 TARSL2A2RTX5 802 aaKnown RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 BECN2A8MW95 431 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 ARNTLO00327 626 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 PRPF6O94906 941 aaKnown RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 MBD4O95243 580 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 CYBBP04839 570 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 MMEP08473 750 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 U2AF1L5P0DN76 240 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 GLI4P10075 376 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 PABPC1P11940 636 aaKnown RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 LTBRP36941 435 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 ECI1P42126 302 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 U2AF1Q01081 240 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 RIPK1Q13546 671 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC152Q4G0S7 254 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 RBM43Q6ZSC3 357 aaKnown RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 DZIP1Q86YF9 867 aaKnown RBP6.71□□□□□ -1.34
SMAD4-203ENST00000585448 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 PPIL6Q8IXY8 311 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 ARL10Q8N8L6 244 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 NETO2Q8NC67 525 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 NEK9Q8TD19 979 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 DIO2Q92813 273 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 FAM84AQ96KN4 292 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 CAPS2Q9BXY5 557 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 CENPHQ9H3R5 247 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 GPR27Q9NS67 375 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 CROTQ9UKG9 612 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 TPCN1Q9ULQ1 816 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms