RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ARHGEF35A5YM69 484 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 ZC3H11AO75152 810 aaKnown RBP eCLIP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 ALDH7A1P49419 539 aaKnown RBP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 NDUFV1P49821 464 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 AFF1P51825 1210 aaKnown RBP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 KRT17Q04695 432 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 PLPP4Q5VZY2 271 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 PDE12Q6L8Q7 609 aaKnown RBP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 FAM178BQ8IXR5 827 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 IGSF22Q8N9C0 903 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 TCF25Q9BQ70 676 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 EIF2AQ9BY44 585 aaKnown RBP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 CD320Q9NPF0 282 aa23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.8■■□□□ 1.4
PPP4R1-228ENST00000584074 LRRIQ4A6NIV6 560 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 PP2D1A8MPX8 630 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 MUTP22033 750 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 AXLP30530 894 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 RNASELQ05823 741 aaKnown RBP23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 NCBP1Q09161 790 aaKnown RBP23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 NOTUMQ6P988 496 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 SMG8Q8ND04 991 aaKnown RBP23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 RSPH1Q8WYR4 309 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 NRDE2Q9H7Z3 1164 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 ENTPD7Q9NQZ7 604 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 CLEC1BQ9P126 229 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 KIAA1024Q9UPX6 916 aa23.79■■□□□ 1.4
PPP4R1-228ENST00000584074 LAD1O00515 517 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 B4GALT5O43286 388 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 B4GALT3O60512 393 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 GLP2RO95838 553 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 ARF4P18085 180 aaPredicted RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 CYP11B2P19099 503 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 NCLP19338 710 aaKnown RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 RBM10P98175 930 aaKnown RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 RILPL1Q5EBL4 403 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 TMEM173Q86WV6 379 aaPredicted RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 ZNF280BQ86YH2 543 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 SNX29Q8TEQ0 813 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 BSNDQ8WZ55 320 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 CCDC51Q96ER9 411 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 MSLNLQ96KJ4 702 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 GBP3Q9H0R5 595 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 CSRNP2Q9H175 543 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 BHMT2Q9H2M3 363 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 RNF39Q9H2S5 420 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 RSAD1Q9HA92 442 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 DDX19AQ9NUU7 478 aaKnown RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 DNAJB4Q9UDY4 337 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 IPPQ9Y573 584 aa23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.78■■□□□ 1.4
PPP4R1-228ENST00000584074 C5orf42Q9H799 3197 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 HIDE1A8MVS5 230 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 PRPHP41219 470 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 DUSP6Q16828 381 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 DTHD1Q6ZMT9 781 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 TMC7Q7Z402 723 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 VN1R2Q8NFZ6 395 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 URGCPQ8TCY9 931 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 RAB34Q9BZG1 259 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 POLD4Q9HCU8 107 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 NGRNQ9NPE2 291 aaKnown RBP23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 CD207Q9UJ71 328 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 BARX2Q9UMQ3 279 aaPredicted RBP23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 FAM50BQ9Y247 325 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 HES2Q9Y543 173 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 CNTNAP2Q9UHC6 1331 aa23.77■■□□□ 1.4
PPP4R1-228ENST00000584074 MBTPS2O43462 519 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 GALTP07902 379 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 ITGA4P13612 1032 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 CDC25AP30304 524 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 LARP1BQ659C4 914 aaKnown RBP23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 CDR2LQ86X02 465 aaPredicted RBP23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 CNNM3Q8NE01 707 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 BCL7CQ8WUZ0 217 aaPredicted RBP23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 TMEM169Q96HH4 297 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 BACH2Q9BYV9 841 aa23.76■■□□□ 1.39
PPP4R1-228ENST00000584074 DDHD2O94830 711 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 POMCP01189 267 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 SLC11A1P49279 550 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 CDCA2Q69YH5 1023 aaPredicted RBP23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 GJD3Q8N144 294 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 KHSRPQ92945 711 aaKnown RBP eCLIP23.75■■□□□ 1.393e-7■□□□□ 9.6
PPP4R1-228ENST00000584074 IGSF21Q96ID5 467 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 STK24Q9Y6E0 443 aa23.75■■□□□ 1.39
PPP4R1-228ENST00000584074 NCOR1O75376 2440 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 ATP2C1P98194 919 aaPredicted RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 SMAD4Q13485 552 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 SMAD2Q15796 467 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 KRT79Q5XKE5 535 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 ZBTB8OSQ8IWT0 167 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 MRPL43Q8N983 215 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 CDCA3Q99618 268 aaPredicted RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 MMTAG2Q9BU76 263 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 APOL6Q9BWW8 343 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 TRIM6Q9C030 488 aaPredicted RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 NXF3Q9H4D5 531 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 UBN1Q9NPG3 1134 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 KANSL3Q9P2N6 904 aa23.74■■□□□ 1.39
PPP4R1-228ENST00000584074 A0A1B0GUA9 196 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms