RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 NOTUMQ6P988 496 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 MRPL10Q7Z7H8 261 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 KLHL23Q8NBE8 558 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 SMG8Q8ND04 991 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 DEPTORQ8TB45 409 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 SYMPKQ92797 1274 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 IFT74Q96LB3 600 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 CCSER1Q9C0I3 900 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 CCDC113Q9H0I3 377 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 FZD8Q9H461 694 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 LMCD1Q9NZU5 365 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 SLC26A4O43511 780 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 ITGB1P05556 798 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PEX3P56589 373 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 MCM6Q14566 821 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PPP2R5AQ15172 486 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 ARSHQ5FYA8 562 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 KCTD17Q8N5Z5 321 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 SLC17A8Q8NDX2 589 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 RASSF8Q8NHQ8 419 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 C11orf84Q9BUA3 381 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PLVAPQ9BX97 442 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PRMT7Q9NVM4 692 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 PLAGL2Q9UPG8 496 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 HES2Q9Y543 173 aa20.62■□□□□ 0.89
PPP4R1-215ENST00000580182 A0A1B0GUA9 196 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 CCDC169A6NNP5 214 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 OFD1O75665 1012 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 PRKCBP05771 671 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 GUCY2CP25092 1073 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 DNAJB1P25685 340 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 PBX3P40426 434 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 NPTX2P47972 431 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 AFF1P51825 1210 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 NCBP1Q09161 790 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 STK38Q15208 465 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 FAM187BQ17R55 369 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 LRRC43Q8N309 656 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 KRI1Q8N9T8 703 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 COLGALT1Q8NBJ5 622 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 P2RX5Q93086 422 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 MRPL38Q96DV4 380 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 INPP5FQ9Y2H2 1132 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 IPPQ9Y573 584 aa20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 MORC2Q9Y6X9 1032 aaPredicted RBP20.61■□□□□ 0.89
PPP4R1-215ENST00000580182 NPTXRO95502 500 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 CAMK1Q14012 370 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 MAPK6Q16659 721 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 SPPL3Q8TCT6 385 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 RAD54LQ92698 747 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 PGBD4Q96DM1 585 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 CCDC51Q96ER9 411 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 PRIMPOLQ96LW4 560 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 DRC1Q96MC2 740 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 ZDHHC9Q9Y397 364 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
PPP4R1-215ENST00000580182 CNTNAP2Q9UHC6 1331 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 SPTLC2O15270 562 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 PRPF4BQ13523 1007 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 SKIV2LQ15477 1246 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 PTPROQ16827 1216 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 SLC27A1Q6PCB7 646 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 GLB1LQ6UWU2 654 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 GPBP1Q86WP2 473 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 TIPINQ9BVW5 301 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 APOL6Q9BWW8 343 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 NXF3Q9H4D5 531 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 PDZD7Q9H5P4 517 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 RSAD1Q9HA92 442 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 AAASQ9NRG9 546 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 PCDHB12Q9Y5F1 795 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 SPTBN5Q9NRC6 3674 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
PPP4R1-215ENST00000580182 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 ACKR2O00590 384 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 ITGA4P13612 1032 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 LAG3P18627 525 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 DMP1Q13316 513 aaPredicted RBP20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 NAALADL2Q58DX5 795 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 NOMO2Q5JPE7 1267 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 NT5DC1Q5TFE4 455 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 KCNT2Q6UVM3 1135 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 TAS1R3Q7RTX0 852 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 PANK2Q9BZ23 570 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 TRIM6Q9C030 488 aaPredicted RBP20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 KMT5AQ9NQR1 393 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 TBC1D13Q9NVG8 400 aa20.58■□□□□ 0.89
PPP4R1-215ENST00000580182 A0A087X0B3 334 aa20.57■□□□□ 0.88
PPP4R1-215ENST00000580182 K7ERI5 159 aa20.57■□□□□ 0.88
PPP4R1-215ENST00000580182 SLC16A4O15374 487 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms