RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PVALEFA0A1B0GWK0 134 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CHN2P52757 468 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RBM46Q8TBY0 533 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LARP4BQ92615 738 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DDX56Q9NY93 547 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PDZK1P1A8MUH7 402 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ASNA1O43681 348 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SRGAP2CP0DJJ0 459 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SRGAP2BP0DMP2 458 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KDELC2Q7Z4H8 507 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 NEK8Q86SG6 692 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PLEKHF1Q96S99 279 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CHRNA3P32297 505 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TOB2Q14106 344 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SAPCD2Q86UD0 394 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 C7orf31Q8N865 590 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF555Q8NEP9 628 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PRCCQ92733 491 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SYTL2Q9HCH5 934 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RAD51BO15315 384 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CYP21A2P08686 494 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ALOX12P18054 663 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM25Q14258 630 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RNF207Q6ZRF8 634 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 FAM186BQ8IYM0 893 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CDKL2Q92772 493 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 A6NJR5 290 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SPDYE16A6NNV3 312 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KLHL41O60662 606 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SEMA3DO95025 777 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TRAPPC10P48553 1259 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF200P98182 395 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CTTNQ14247 550 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 FBXO31Q5XUX0 539 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DNAAF3Q8N9W5 541 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PICK1Q9NRD5 415 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 POLA2Q14181 598 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PDIA5Q14554 519 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SLC9A5Q14940 896 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RASA2Q15283 850 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZCRB1Q8TBF4 217 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 STRBPQ96SI9 672 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 FDPSP14324 419 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 QARSP47897 775 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RAD23AP54725 363 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TRIP4Q15650 581 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KBTBD2Q8IY47 623 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PABPC3Q9H361 631 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SLC12A6Q9UHW9 1150 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KAT6BQ8WYB5 2073 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CACNA1DQ01668 2161 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF233A6NK53 670 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 MYO1DO94832 1006 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PYGMP11217 842 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SLC16A2P36021 539 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RNF220Q5VTB9 566 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PLEKHA7Q6IQ23 1121 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SYDE1Q6ZW31 735 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 UTS2BQ765I0 119 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TCAIMQ8N3R3 496 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SERPINB12Q96P63 405 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CYP4F11Q9HBI6 524 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RABL2AQ9UBK7 228 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TTC7AQ9ULT0 858 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 COQ6Q9Y2Z9 468 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SNRPAP09012 282 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PABPC4Q13310 644 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ERMARDQ5T6L9 678 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC8EQ6NSJ5 796 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PID1Q7Z2X4 250 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 APPBP2Q92624 585 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PREBQ9HCU5 417 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ADAM22Q9P0K1 906 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ATP6V1E1P36543 226 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LACTB2Q53H82 288 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 RSBN1Q5VWQ0 802 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LVRNQ6Q4G3 990 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC149Q6ZUS6 474 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TSSK1BQ9BXA7 367 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TUFMP49411 452 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 MKRN4PQ13434 485 aaPredicted RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 MRPL47Q9HD33 250 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 A1CFQ9NQ94 594 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 BARX2Q9UMQ3 279 aaPredicted RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 FAM32AQ9Y421 112 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RNMTO43148 476 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RAD51CO43502 376 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 AKR1B1P15121 316 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 FGFR4P22455 802 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 GRK3P35626 688 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 EIF6P56537 245 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 C16orf89Q6UX73 402 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 YTHDF3Q7Z739 585 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 GLYCTKQ8IVS8 523 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF654Q8IZM8 581 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RASGRP4Q8TDF6 673 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms