RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 KCNJ15Q99712 375 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ORAI3Q9BRQ5 295 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 MRIQ9BWK5 157 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ARHGAP39Q9C0H5 1083 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 COA1Q9GZY4 146 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 IRF2BPLQ9H1B7 796 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 DEFB129Q9H1M3 183 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 SEMA6BQ9H3T3 888 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CD209Q9NNX6 404 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 SLC5A4Q9NY91 659 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 MARCH2Q9P0N8 246 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 GULP1Q9UBP9 304 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 DBF4Q9UBU7 674 aaPredicted RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 B4GALT6Q9UBX8 382 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 TSPYL4Q9UJ04 414 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 NUDCQ9Y266 331 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF281Q9Y2X9 895 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 COQ6Q9Y2Z9 468 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 RFX7Q2KHR2 1363 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 UTYO14607 1347 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 XDHP47989 1333 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF521Q96K83 1311 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 POLR2AP24928 1970 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 COL2A1P02458 1487 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PTPDC1A2A3K4 754 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PI4KAP2A4QPH2 592 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 H0YGN5 161 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 WNT9AO14904 365 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ULK1O75385 1050 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 DGKIO75912 1065 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 GLRX3O76003 335 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 UFL1O94874 794 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FKBP9O95302 570 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 F2P00734 622 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FUCA1P04066 466 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FURINP09958 794 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ZBTB48P10074 688 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 GNAT1P11488 350 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FGFR2P21802 821 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 RFX5P48382 616 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 CCT4P50991 539 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 KPNA1P52294 538 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 CTSWP56202 376 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 CORO7P57737 925 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 TMPRSS15P98073 1019 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 CHRNEQ04844 493 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 SPIRE1Q08AE8 756 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FAPQ12884 760 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 GCKRQ14397 625 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 STAT4Q14765 748 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 MSMPQ1L6U9 139 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 RABL6Q3YEC7 729 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 TMEM177Q53S58 311 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 BRDTQ58F21 947 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 RALGPS1Q5JS13 557 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 BEND3Q5T5X7 828 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 MBLAC2Q68D91 279 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 IQSEC1Q6DN90 963 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 APOBEC3HQ6NTF7 200 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ABHD17CQ6PCB6 329 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 KSR2Q6VAB6 950 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FKBP9P1Q75LS8 142 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 OVCH1Q7RTY7 1134 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 NECAB2Q7Z6G3 386 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 C11orf74Q86VG3 221 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 SPATS2Q86XZ4 545 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PASD1Q8IV76 773 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PI4KAP1Q8N8J0 262 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 CHST14Q8NCH0 376 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF384Q8TF68 577 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 LINC01599Q8WXQ3 324 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 DPF3Q92784 378 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 DCPSQ96C86 337 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 SCYL1Q96KG9 808 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 FAM84BQ96KN1 310 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 JMJD8Q96S16 334 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 JAM3Q9BX67 310 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PCGF6Q9BYE7 350 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ADAMTS10Q9H324 1103 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 HYPKQ9NX55 129 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 SLAMF8Q9P0V8 285 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 KLHL42Q9P2K6 505 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 PPARGC1AQ9UBK2 798 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 TMEM59LQ9UK28 342 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 ANGEL1Q9UNK9 670 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 APOBEC2Q9Y235 224 aaKnown RBP2.98□□□□□ -1.93
CPSF6-207ENST00000551516 RWDD3Q9Y3V2 267 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 RIPOR2Q9Y4F9 1068 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 NUB1Q9Y5A7 615 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 TAF6LQ9Y6J9 622 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 XIRP2A4UGR9 3374 aa2.98□□□□□ -1.93
CPSF6-207ENST00000551516 SLC12A8A0AV02 714 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 FITM1A5D6W6 292 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 MANSC4A6NHS7 340 aaPredicted RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF891A8MT65 544 aaPredicted RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 C22orf46C9J442 243 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 BTBD19C9JJ37 291 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 KRIT1O00522 736 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 GPR39O43194 453 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms