RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ASTE1Q2TB18 679 aaPredicted RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 MCMDC2Q4G0Z9 681 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 KLHDC7AQ5VTJ3 777 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 PI16Q6UXB8 463 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 PNMA8AQ86V59 439 aaPredicted RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 LRRC34Q8IZ02 419 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 RNF10Q8N5U6 811 aaKnown RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 SAMD3Q8N6K7 520 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 MB21D1Q8N884 522 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 RBBP8NLQ8NC74 664 aaPredicted RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 CAGE1Q8TC20 777 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 SCFD2Q8WU76 684 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 CPLX3Q8WVH0 158 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 LRRC45Q96CN5 670 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 PGM2Q96G03 612 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 DHTKD1Q96HY7 919 aaPredicted RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 KAZALD1Q96I82 304 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 IFT74Q96LB3 600 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 GSDMAQ96QA5 445 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 NR1H4Q96RI1 486 aaPredicted RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 SPATA16Q9BXB7 569 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 LRMDAQ9H2I8 198 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 DPH5Q9H2P9 285 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 VCXQ9H320 206 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 EPB41L4BQ9H329 900 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 ECT2Q9H8V3 914 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 NCOA5Q9HCD5 579 aaKnown RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 INIPQ9NRY2 104 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 ABCF3Q9NUQ8 709 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 TBCCD1Q9NVR7 557 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 CTTNBP2NLQ9P2B4 639 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 STK17AQ9UEE5 414 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 TRIM33Q9UPN9 1127 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 NID2Q14112 1375 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 MAP2P11137 1827 aaKnown RBP5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 TMEM131LA2VDJ0 1609 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 NFAT5O94916 1531 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 CPS1P31327 1500 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 PNPLA7Q6ZV29 1317 aa5.74□□□□□ -1.49
LSM3P2-201ENST00000551246 CPDO75976 1380 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 USP31Q70CQ4 1352 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 KANSL1LA0AUZ9 987 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 MAGEA13PA6NCF6 341 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 DCDC2CA8MYV0 355 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 E7EWF7 191 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 RBAK-RBAKDNI3L0D1 243 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 LILRB5O75023 590 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 HIP1RO75146 1068 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TACC1O75410 805 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 HEXIM1O94992 359 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 EYA4O95677 639 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 GNA14O95837 355 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 ITGA2BP08514 1039 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 IDEP14735 1019 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 EIF2S2P20042 333 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 SMARCA1P28370 1054 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 HOXA10P31260 410 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 CYLC1P35663 651 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 PDE6BP35913 854 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TOB1P50616 345 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 PSMD7P51665 324 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 USP11P51784 963 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 EIF3BP55884 814 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 LACTBP83111 547 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 GSTM4Q03013 218 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 ACVR2BQ13705 512 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 ADRM1Q16186 407 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF827Q17R98 1081 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TCP11X2Q5H9J9 407 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TTC39AQ5SRH9 613 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 KIAA0319Q5VV43 1072 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 RNF43Q68DV7 783 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 GALNT17Q6IS24 598 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 C8orf74Q6P047 294 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 DUS1LQ6P1R4 473 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 NCCRP1Q6ZVX7 275 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 CPLX4Q7Z7G2 160 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 AACSQ86V21 672 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 COL23A1Q86Y22 540 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 MB21D2Q8IYB1 491 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 AGGF1Q8N302 714 aaeCLIP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TMEM102Q8N9M5 508 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 EPS8L3Q8TE67 593 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 DIS3LQ8TF46 1054 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 DNAJC9Q8WXX5 260 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 INPP5DQ92835 1189 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TEKT1Q969V4 418 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 SPACA7Q96KW9 195 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 TCF12Q99081 682 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 MPHOSPH6Q99547 160 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 POP1Q99575 1024 aaKnown RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 OSMRQ99650 979 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 POLR3CQ9BUI4 534 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 CDK19Q9BWU1 502 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 BHLHE41Q9C0J9 482 aaPredicted RBP5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 MIS12Q9H081 205 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 RXFP1Q9HBX9 757 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 EPB41L5Q9HCM4 733 aa5.73□□□□□ -1.49
LSM3P2-201ENST00000551246 LUC7LQ9NQ29 371 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms