RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZDHHC15Q96MV8 337 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 CDCA3Q99618 268 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ALDH8A1Q9H2A2 487 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ARRDC1-AS1Q9H2J1 176 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 GSX1Q9H4S2 264 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 POMKQ9H5K3 350 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 KCNK12Q9HB15 430 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 CNTN3Q9P232 1028 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 PLEKHB1Q9UF11 243 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 MED13LQ71F56 2210 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 BOD1L1Q8NFC6 3051 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 PDZD2O15018 2839 aa2.78□□□□□ -1.97
TRAV1-1-201ENST00000542354 PTPRFP10586 1907 aa2.78□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADGRG4Q8IZF6 3080 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 TET1Q8NFU7 2136 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 FRMPD2Q68DX3 1309 aaPredicted RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 A0A096LPE4 126 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 A0A1W2PPZ6 126 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 PER2O15055 1255 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 NCAM2O15394 837 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 LRRN2O75325 713 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 TNFRSF21O75509 655 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 CEACAM5P06731 702 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 STARD6P59095 220 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 RHDQ02161 417 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 CAMK1Q14012 370 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMEM132AQ24JP5 1023 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 NAALADL2Q58DX5 795 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 RPS26P11Q5JNZ5 115 aaPredicted RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ATAT1Q5SQI0 421 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 XRRA1Q6P2D8 792 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 SYCE2Q6PIF2 218 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 CEP68Q76N32 757 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 OTOP3Q7RTS5 596 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADGRD2Q7Z7M1 963 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZSCAN29Q8IWY8 852 aaPredicted RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 MYOCDQ8IZQ8 938 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 DEFB124Q8NES8 71 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 MICAL1Q8TDZ2 1067 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZNF428Q96B54 188 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 MED8Q96G25 268 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 KIF2CQ99661 725 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 GPR20Q99678 358 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 EDEM2Q9BV94 578 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 APOL5Q9BWW9 433 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 OSBPL6Q9BZF3 934 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 FOXQ1Q9C009 403 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 UPF3AQ9H1J1 476 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADAM7Q9H2U9 754 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 LIN7BQ9HAP6 207 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 SSU72Q9NP77 194 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ARHGEF3Q9NR81 526 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 VPS45Q9NRW7 570 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 KRT82Q9NSB4 513 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 TRMT13Q9NUP7 481 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 DBR1Q9UK59 544 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 PCOLCE2Q9UKZ9 415 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 PLAGL2Q9UPG8 496 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 DIS3Q9Y2L1 958 aaKnown RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 ATMQ13315 3056 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 RP1L1Q8IWN7 2480 aaPredicted RBP2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
TRAV1-1-201ENST00000542354 SCN5AQ14524 2016 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZMYM2Q9UBW7 1377 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLSPNQ9HAW4 1339 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 SPAARA0A1B0GVQ0 90 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 KANSL1LA0AUZ9 987 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 RRP8O43159 456 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 NARSO43776 548 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 B4GALT3O60512 393 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CNMDO75829 334 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 EOMESO95936 686 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 B3GALT4O96024 378 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 RNASE1P07998 156 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMEM253P0C7T8 217 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM87AP0C7U9 286 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 SRFP11831 508 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FCER1AP12319 257 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 RAC2P15153 192 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 ITPKBP27987 946 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 EIF1AXP47813 144 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLCN7P51798 805 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 NKX3-2P78367 333 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 ID3Q02535 119 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CYP4F3Q08477 520 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 IKZF1Q13422 519 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 MLANAQ16655 118 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CDCA8Q53HL2 280 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZBTB41Q5SVQ8 909 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 B4GALNT3Q6L9W6 998 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 C15orf52Q6ZUT6 534 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCNJLQ8IV13 435 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 LRRC56Q8IYG6 542 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 SMYD4Q8IYR2 804 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM26EQ8N5C1 309 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 MSL3Q8N5Y2 521 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms