RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TSKSQ9UJT2 592 aa15.99■□□□□ 0.15
DDX55-209ENST00000542286 ODF2LQ9ULJ1 636 aa15.99■□□□□ 0.15
DDX55-209ENST00000542286 CAPN7Q9Y6W3 813 aa15.99■□□□□ 0.15
DDX55-209ENST00000542286 EPC2Q52LR7 807 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 ZBED3Q96IU2 234 aaPredicted RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 DPH5Q9H2P9 285 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 CENPHQ9H3R5 247 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 UBIAD1Q9Y5Z9 338 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 STK24Q9Y6E0 443 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 KRIT1O00522 736 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 SART1O43290 800 aaKnown RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 SGPL1O95470 568 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 TNFAIP3P21580 790 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 ADSSP30520 456 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 VAMP7P51809 220 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 VPS36Q86VN1 386 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 IFT20Q8IY31 132 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 DHX38Q92620 1227 aaKnown RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 SEMA4DQ92854 862 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 TRIM51Q9BSJ1 452 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 LARSQ9P2J5 1176 aaKnown RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 GRIN2DO15399 1336 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 RPTORQ8N122 1335 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 DOCK5Q9H7D0 1870 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 ZNF233A6NK53 670 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 TTI1O43156 1089 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 FGGP02679 453 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 ARHGEF16Q5VV41 709 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 RNF207Q6ZRF8 634 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 ANO5Q75V66 913 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 AGBL3Q8NEM8 1001 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 PIK3R5Q8WYR1 880 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 TCEAL9Q9UHQ7 104 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 HACL1Q9UJ83 578 aa15.98■□□□□ 0.15
DDX55-209ENST00000542286 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
DDX55-209ENST00000542286 HMGCS2P54868 508 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 C2CD6Q53TS8 623 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PPM1KQ8N3J5 372 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PDCD2LQ9BRP1 358 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PI4K2AQ9BTU6 479 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 DEFB129Q9H1M3 183 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 ERVK-5Q9HDB9 667 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
DDX55-209ENST00000542286 MYO1FO00160 1098 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 NFKBIEO00221 500 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 DAPK3O43293 454 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 KRT13P13646 458 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PLS3P13797 630 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 SSTR3P32745 418 aaPredicted RBP15.97■□□□□ 0.15
DDX55-209ENST00000542286 FSTL1Q12841 308 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 ALG3Q92685 438 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PCDHB18PQ96TA0 734 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 SYT11Q9BT88 431 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 SEL1LQ9UBV2 794 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 SYNPO2Q9UMS6 1093 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 STXBP5LQ9Y2K9 1186 aa15.97■□□□□ 0.15
DDX55-209ENST00000542286 PSME4Q14997 1843 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 H0YHG0 523 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 WDR46O15213 610 aaKnown RBP15.96■□□□□ 0.15
DDX55-209ENST00000542286 CYP26A1O43174 497 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 ECHS1P30084 290 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 GMPSP49915 693 aaPredicted RBP15.96■□□□□ 0.15
DDX55-209ENST00000542286 PCNX4Q63HM2 1172 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 SLC47A2Q86VL8 602 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
DDX55-209ENST00000542286 CTNNBL1Q8WYA6 563 aaPredicted RBP15.96■□□□□ 0.15
DDX55-209ENST00000542286 KRT35Q92764 455 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 CABS1Q96KC9 395 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 PXMP2Q9NR77 195 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 TMEM59LQ9UK28 342 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 ZNF862O60290 1169 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
DDX55-209ENST00000542286 TRAF1Q13077 416 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 EMBQ6PCB8 327 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 MKNK1Q9BUB5 465 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 FBXL5Q9UKA1 691 aa15.96■□□□□ 0.15
DDX55-209ENST00000542286 ADGRA3Q8IWK6 1321 aa15.96■□□□□ 0.14
DDX55-209ENST00000542286 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 PGRMC1O00264 195 aaKnown RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 HSF2BPO75031 334 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 FTLP02792 175 aaPredicted RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 DLATP10515 647 aaKnown RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 PDCLQ13371 301 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 LLGL2Q6P1M3 1020 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 STXBP4Q6ZWJ1 553 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 GLG1Q92896 1179 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 KREMEN1Q96MU8 473 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 RUFY1Q96T51 708 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 SH3GL2Q99962 352 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 GABBR1Q9UBS5 961 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 VWA5AO00534 786 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms