RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 C2orf71A6NGG8 1288 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 AXLP30530 894 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 GUCY1B3Q02153 619 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 UBXN11Q5T124 520 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 ANKRD54Q6NXT1 300 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 NOTUMQ6P988 496 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 AGMOQ6ZNB7 445 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 MRPL43Q8N983 215 aaKnown RBP23.8■■□□□ 1.4
VPS51-214ENST00000534124 CNNM3Q8NE01 707 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 IGSF21Q96ID5 467 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 NFKBIZQ9BYH8 718 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 TMEM60Q9H2L4 133 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 NRDE2Q9H7Z3 1164 aa23.8■■□□□ 1.4
VPS51-214ENST00000534124 NT5C1B-RDH14C9J2C7 533 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 TSPAN1O60635 241 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 XRCC6P12956 609 aaKnown RBP eCLIP23.79■■□□□ 1.4
VPS51-214ENST00000534124 HOXB8P17481 243 aaPredicted RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 NCLP19338 710 aaKnown RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 CAPSQ13938 189 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 HERC4Q5GLZ8 1057 aaPredicted RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 DDX53Q86TM3 631 aaKnown RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 TMEM173Q86WV6 379 aaPredicted RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 FBXO18Q8NFZ0 1043 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 PHF7Q9BWX1 381 aaPredicted RBP23.79■■□□□ 1.4
VPS51-214ENST00000534124 ZBP1Q9H171 429 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 TUFT1Q9NNX1 390 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 KANSL3Q9P2N6 904 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 STK39Q9UEW8 545 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 IRAK3Q9Y616 596 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 MUC6Q6W4X9 2439 aa23.79■■□□□ 1.4
VPS51-214ENST00000534124 LOC730098B7Z3J9 87 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 GALTP07902 379 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 ARL2P36404 184 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 TECP42680 631 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 NCBP1Q09161 790 aaKnown RBP23.78■■□□□ 1.4
VPS51-214ENST00000534124 GIT2Q14161 759 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 CBX2Q14781 532 aaPredicted RBP23.78■■□□□ 1.4
VPS51-214ENST00000534124 C8orf34Q49A92 452 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 RNF135Q8IUD6 432 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 VPS52Q8N1B4 723 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 ASAP3Q8TDY4 903 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 PIGOQ8TEQ8 1089 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 CASP10Q92851 521 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 KIF2CQ99661 725 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 UBN1Q9NPG3 1134 aa23.78■■□□□ 1.4
VPS51-214ENST00000534124 INO80B-WBP1J3KQ70 363 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 OR52Z1P0C646 297 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 SPATA31C1P0DKV0 1188 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 ATP2B1P20020 1258 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 RBM25P49756 843 aaKnown RBP23.77■■□□□ 1.4
VPS51-214ENST00000534124 MBTD1Q05BQ5 628 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 LLGL2Q6P1M3 1020 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 POLR3CQ9BUI4 534 aaPredicted RBP23.77■■□□□ 1.4
VPS51-214ENST00000534124 GBP3Q9H0R5 595 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 S1PR5Q9H228 398 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 DNAJB4Q9UDY4 337 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 MUTYHQ9UIF7 546 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 HCFC2Q9Y5Z7 792 aa23.77■■□□□ 1.4
VPS51-214ENST00000534124 TECTAO75443 2155 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 ZNF318Q5VUA4 2279 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 INPPL1O15357 1258 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 USO1O60763 962 aaKnown RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 CTSAP10619 480 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 GLRA2P23416 452 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 PLA2G5P39877 138 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 TRAPPC10P48553 1259 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 SLC11A1P49279 550 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 SYCE2Q6PIF2 218 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 CATSPER3Q86XQ3 398 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 NOSTRINQ8IVI9 506 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 FAM184AQ8NB25 1140 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 SMG8Q8ND04 991 aaKnown RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 MCPH1Q8NEM0 835 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 ERMNQ8TAM6 284 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 BCL7CQ8WUZ0 217 aaPredicted RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 TMEM175Q9BSA9 504 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 POLR3FQ9H1D9 316 aaPredicted RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 DBR1Q9UK59 544 aaKnown RBP23.76■■□□□ 1.39
VPS51-214ENST00000534124 IPPQ9Y573 584 aa23.76■■□□□ 1.39
VPS51-214ENST00000534124 DENND4AQ7Z401 1863 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 B4GALT3O60512 393 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 ITGA4P13612 1032 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 CA8P35219 290 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 GNL2Q13823 731 aaKnown RBP23.75■■□□□ 1.39
VPS51-214ENST00000534124 AMHR2Q16671 573 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 TPRNQ4KMQ1 711 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 ZNF280BQ86YH2 543 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 FAM193BQ96PV7 902 aaPredicted RBP23.75■■□□□ 1.39
VPS51-214ENST00000534124 CSRNP2Q9H175 543 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 ZMYM2Q9UBW7 1377 aa23.75■■□□□ 1.39
VPS51-214ENST00000534124 CLASP2O75122 1294 aaKnown RBP23.74■■□□□ 1.39
VPS51-214ENST00000534124 MED24O75448 989 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 CXCL14O95715 111 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 RPA1P27694 616 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 TTC38Q5R3I4 469 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 HAUS3Q68CZ6 603 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 HACE1Q8IYU2 909 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 NACC1Q96RE7 527 aa23.74■■□□□ 1.39
VPS51-214ENST00000534124 EIF2AQ9BY44 585 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms