RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 RABEP2Q9H5N1 569 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 WDR64B1ANS9 1081 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 DLG4P78352 724 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 ITIH3Q06033 890 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 TMEM132BQ14DG7 1078 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
USP35-207ENST00000530546 APOBEC3FQ8IUX4 373 aaKnown RBP12.51□□□□□ -0.41
USP35-207ENST00000530546 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 GOLPH3Q9H4A6 298 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 DMAC2Q9NW81 257 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 HYOU1Q9Y4L1 999 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CD2APQ9Y5K6 639 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 HSF2BPO75031 334 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 PLS3P13797 630 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CCND2P30279 289 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 DSG3P32926 999 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 EPHB4P54760 987 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
USP35-207ENST00000530546 PSMC5P62195 406 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 MYL7Q01449 175 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 GHRHRQ02643 423 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 PDCLQ13371 301 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP35-207ENST00000530546 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
USP35-207ENST00000530546 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 TMOD4Q9NZQ9 345 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 ZNF112Q9UJU3 913 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 UBE4BO95155 1302 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 MYH10P35580 1976 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 PPP1R37O75864 691 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 LSP1P33241 339 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 CLNS1AP54105 237 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 NAB2Q15742 525 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 MMGT1Q8N4V1 131 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 ACCSQ96QU6 501 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 INTS2Q9H0H0 1204 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 DBR1Q9UK59 544 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 LRRN2O75325 713 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 KRT13P13646 458 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 BFSP1Q12934 665 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 GRIK3Q13003 919 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 DRAP1Q14919 205 aaPredicted RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 ALKBH5Q6P6C2 394 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 RNF10Q8N5U6 811 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 CAVIN3Q969G5 261 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 MKNK1Q9BUB5 465 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 SEPT11Q9NVA2 429 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 MAP3K20Q9NYL2 800 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
USP35-207ENST00000530546 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 ZNF214Q9UL59 606 aaPredicted RBP12.5□□□□□ -0.41
USP35-207ENST00000530546 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 STAT1P42224 750 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 JAK3P52333 1124 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 KRT76Q01546 638 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 NNTQ13423 1086 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 TTC19Q6DKK2 380 aaPredicted RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 TLDC1Q6P9B6 456 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 C3orf20Q8ND61 904 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 RBBP6Q7Z6E9 1792 aaKnown RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 EVI5O60447 810 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 GCLMP48507 274 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 ZNF572Q7Z3I7 529 aaPredicted RBP12.49□□□□□ -0.41
USP35-207ENST00000530546 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 CEP170P1Q96L14 293 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 EMSYQ7Z589 1322 aa12.49□□□□□ -0.41
USP35-207ENST00000530546 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
USP35-207ENST00000530546 FDX1P10109 184 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 JAM2P57087 298 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms