RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-218ENST00000527118 SMRP1Q8NCR6 262 aa17.36■□□□□ 0.37
RBBP4-218ENST00000527118 CPB2Q96IY4 423 aa17.36■□□□□ 0.37
RBBP4-218ENST00000527118 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
RBBP4-218ENST00000527118 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
RBBP4-218ENST00000527118 POLR3FQ9H1D9 316 aaPredicted RBP17.36■□□□□ 0.37
RBBP4-218ENST00000527118 NGRNQ9NPE2 291 aaKnown RBP17.36■□□□□ 0.37
RBBP4-218ENST00000527118 C11orf16Q9NQ32 467 aa17.36■□□□□ 0.37
RBBP4-218ENST00000527118 B4GALT3O60512 393 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 GLRA2P23416 452 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 AFF1P51825 1210 aaKnown RBP17.35■□□□□ 0.37
RBBP4-218ENST00000527118 SMC1AQ14683 1233 aaKnown RBP17.35■□□□□ 0.37
RBBP4-218ENST00000527118 TMEM31Q5JXX7 168 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 POTEGQ6S5H5 508 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 MRPL10Q7Z7H8 261 aaKnown RBP17.35■□□□□ 0.37
RBBP4-218ENST00000527118 ZNF280BQ86YH2 543 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 URGCPQ8TCY9 931 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 TMEM169Q96HH4 297 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 EIF2AQ9BY44 585 aaKnown RBP17.35■□□□□ 0.37
RBBP4-218ENST00000527118 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 TUFT1Q9NNX1 390 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 GPRC5CQ9NQ84 441 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 DNAJB4Q9UDY4 337 aa17.35■□□□□ 0.37
RBBP4-218ENST00000527118 GALTP07902 379 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 KCNC3Q14003 757 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 RABEP1Q15276 862 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 VPS52Q8N1B4 723 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 SMG8Q8ND04 991 aaKnown RBP17.34■□□□□ 0.37
RBBP4-218ENST00000527118 BCL7CQ8WUZ0 217 aaPredicted RBP17.34■□□□□ 0.37
RBBP4-218ENST00000527118 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 IGSF21Q96ID5 467 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
RBBP4-218ENST00000527118 APOL5Q9BWW9 433 aa17.34■□□□□ 0.37
RBBP4-218ENST00000527118 USP15Q9Y4E8 981 aaPredicted RBP17.34■□□□□ 0.37
RBBP4-218ENST00000527118 FSD2A1L4K1 749 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 C2orf71A6NGG8 1288 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 DDHD2O94830 711 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 POMCP01189 267 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 AXLP30530 894 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 SLC11A1P49279 550 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 NOTUMQ6P988 496 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 IFNLR1Q8IU57 520 aaPredicted RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 ERMNQ8TAM6 284 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 AUTS2Q8WXX7 1259 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 POP1Q99575 1024 aaKnown RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
RBBP4-218ENST00000527118 HES2Q9Y543 173 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 IPPQ9Y573 584 aa17.33■□□□□ 0.36
RBBP4-218ENST00000527118 CNTNAP2Q9UHC6 1331 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 B4GALT5O43286 388 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ST18O60284 1047 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 GPR37L1O60883 481 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 CXCL14O95715 111 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 SRGAP2BP0DMP2 458 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ITGA4P13612 1032 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ALADP13716 330 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ARF4P18085 180 aaPredicted RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 RPA1P27694 616 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 TOB1P50616 345 aaPredicted RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 NCBP1Q09161 790 aaKnown RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 PCBP1Q15365 356 aaKnown RBP eCLIP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 AMHR2Q16671 573 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ANKRD54Q6NXT1 300 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 TMEM184AQ6ZMB5 413 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 CDR2LQ86X02 465 aaPredicted RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 FAM193BQ96PV7 902 aaPredicted RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 APOL6Q9BWW8 343 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ZBP1Q9H171 429 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
RBBP4-218ENST00000527118 DBR1Q9UK59 544 aaKnown RBP17.32■□□□□ 0.36
RBBP4-218ENST00000527118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.31■□□□□ 0.36
RBBP4-218ENST00000527118 DCXO43602 365 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 CD2BP2O95400 341 aaKnown RBP17.31■□□□□ 0.36
RBBP4-218ENST00000527118 U2AF2P26368 475 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■□□□□ 8.6
RBBP4-218ENST00000527118 SYCE2Q6PIF2 218 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 PADI6Q6TGC4 694 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 DDX53Q86TM3 631 aaKnown RBP17.31■□□□□ 0.36
RBBP4-218ENST00000527118 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 CCDC51Q96ER9 411 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 VN1R3Q9BXE9 311 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 NFKBIZQ9BYH8 718 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 MUTYHQ9UIF7 546 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 PCDHB6Q9Y5E3 794 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 HCFC2Q9Y5Z7 792 aa17.31■□□□□ 0.36
RBBP4-218ENST00000527118 ARHGEF35A5YM69 484 aa17.3■□□□□ 0.36
RBBP4-218ENST00000527118 CLASP2O75122 1294 aaKnown RBP17.3■□□□□ 0.36
RBBP4-218ENST00000527118 CCT6AP40227 531 aaKnown RBP17.3■□□□□ 0.36
RBBP4-218ENST00000527118 MLH1P40692 756 aa17.3■□□□□ 0.36
RBBP4-218ENST00000527118 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■□□□ 12.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms