RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 TMEM31Q5JXX7 168 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 TTC38Q5R3I4 469 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 UBXN11Q5T124 520 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 FAM184AQ8NB25 1140 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 PIGOQ8TEQ8 1089 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 TMEM169Q96HH4 297 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 NFKBIZQ9BYH8 718 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 POLR3FQ9H1D9 316 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-204ENST00000525207 RSAD1Q9HA92 442 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 TUFT1Q9NNX1 390 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 NGRNQ9NPE2 291 aaKnown RBP10.51□□□□□ -0.73
SF3B2-204ENST00000525207 CNTNAP2Q9UHC6 1331 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 FAM86C2PA6NEL3 165 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 NT5C1B-RDH14C9J2C7 533 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 MED24O75448 989 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 OFD1O75665 1012 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 GLRA2P23416 452 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 AXLP30530 894 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 ARL2P36404 184 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 TRAPPC10P48553 1259 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 ALDH7A1P49419 539 aaKnown RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 MBTD1Q05BQ5 628 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 RABEP1Q15276 862 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 AMHR2Q16671 573 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 NOTUMQ6P988 496 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 TMEM184AQ6ZMB5 413 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 MRPL10Q7Z7H8 261 aaKnown RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 CATSPER3Q86XQ3 398 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 URGCPQ8TCY9 931 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 BCL7CQ8WUZ0 217 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 PGBD4Q96DM1 585 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 CCDC51Q96ER9 411 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 LRFN3Q9BTN0 628 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 NRDE2Q9H7Z3 1164 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
SF3B2-204ENST00000525207 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 USP15Q9Y4E8 981 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-204ENST00000525207 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 INO80B-WBP1J3KQ70 363 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 INPPL1O15357 1258 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 DCXO43602 365 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 GPR37L1O60883 481 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 GALTP07902 379 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 XRCC6P12956 609 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 U2AF2P26368 475 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 RPA1P27694 616 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 TECP42680 631 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 SLC11A1P49279 550 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 AFF1P51825 1210 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 GNL2Q13823 731 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 NBR1Q14596 966 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 ZNF174Q15697 407 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 CDCA2Q69YH5 1023 aaPredicted RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 SMG8Q8ND04 991 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 CNNM3Q8NE01 707 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 MCPH1Q8NEM0 835 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 ERMNQ8TAM6 284 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 SUSD6Q92537 303 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 IGSF21Q96ID5 467 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 POLR3CQ9BUI4 534 aaPredicted RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 EIF2AQ9BY44 585 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 GBP3Q9H0R5 595 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 GPRC5CQ9NQ84 441 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 RAPGEFL1Q9UHV5 662 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 NOL7Q9UMY1 257 aaKnown RBP10.49□□□□□ -0.73
SF3B2-204ENST00000525207 IPPQ9Y573 584 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 HCFC2Q9Y5Z7 792 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 ZMYM2Q9UBW7 1377 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 TECTAO75443 2155 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
SF3B2-204ENST00000525207 C2orf16Q68DN1 1984 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
SF3B2-204ENST00000525207 LRRIQ4A6NIV6 560 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 B4GALT5O43286 388 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 ST18O60284 1047 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 CTSAP10619 480 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 ALADP13716 330 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 ARF4P18085 180 aaPredicted RBP10.48□□□□□ -0.73
SF3B2-204ENST00000525207 MUTP22033 750 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 MLH1P40692 756 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.733e-8■■□□□ 11.7
SF3B2-204ENST00000525207 ANKRD54Q6NXT1 300 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 LLGL2Q6P1M3 1020 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 DDX53Q86TM3 631 aaKnown RBP10.48□□□□□ -0.73
SF3B2-204ENST00000525207 ZNF280BQ86YH2 543 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 VPS52Q8N1B4 723 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 MRPL43Q8N983 215 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms