RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DCTN1Q14203 1278 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 PKN2Q16513 984 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CCDC157Q569K6 752 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 PITRM1Q5JRX3 1037 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CCDC62Q6P9F0 684 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 NOSTRINQ8IVI9 506 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TRMT2AQ8IZ69 625 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 TXLNBQ8N3L3 684 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TCP11L2Q8N4U5 519 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ARL6IP6Q8N6S5 226 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TSPYL6Q8N831 410 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 GALNT6Q8NCL4 622 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TDRD7Q8NHU6 1098 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 STT3BQ8TCJ2 826 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 AUTS2Q8WXX7 1259 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FBXL18Q96ME1 805 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TIGD1Q96MW7 591 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 C7orf26Q96N11 449 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 KCNJ15Q99712 375 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 PTPN18Q99952 460 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ADPGKQ9BRR6 497 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CARD10Q9BWT7 1032 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ASPNQ9BXN1 380 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TXLNGYQ9BZA5 131 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 KIAA1683Q9H0B3 1180 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 HAUS2Q9NVX0 235 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ARGLU1Q9NWB6 273 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 CRIM1Q9NZV1 1036 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FRRS1LQ9P0K9 344 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 USP36Q9P275 1121 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 VPS28Q9UK41 221 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 MINPP1Q9UNW1 487 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ADAMTS8Q9UP79 889 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 GPRASP1Q5JY77 1395 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SYNGAP1Q96PV0 1343 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 PI4KAP2A4QPH2 592 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SHISA8B8ZZ34 492 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FSCN2O14926 492 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 PHGDHO43175 533 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 RTN3O95197 1032 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 HSPA4LO95757 839 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 BAG2O95816 211 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 IFNGR1P15260 489 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ALOX15P16050 662 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 TPP2P29144 1249 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 POLD2P49005 469 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CASP6P55212 293 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 BCAR1P56945 870 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FOXO4P98177 505 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ERV3-1Q14264 604 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SMAD1Q15797 465 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 CNGA2Q16280 664 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CIAPIN1Q6FI81 312 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 GPAT2Q6NUI2 795 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FAM117BQ6P1L5 589 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 TMC3Q7Z5M5 1100 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 UBE2Q1Q7Z7E8 422 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 C2CD5Q86YS7 1000 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FTSJ3Q8IY81 847 aaKnown RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 CARNMT1Q8N4J0 409 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 NEDD1Q8NHV4 660 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SPPL3Q8TCT6 385 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ADAMTS15Q8TE58 950 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 RGMAQ96B86 450 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 KLHDC7BQ96G42 594 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 KCNC2Q96PR1 638 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FANCD2OSQ96PS1 177 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SPAG5Q96R06 1193 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FOXQ1Q9C009 403 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ACSS2Q9NR19 701 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 MYO1AQ9UBC5 1043 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 RSF1Q96T23 1441 aaPredicted RBP4.56□□□□□ -1.68
SKP1-209ENST00000522552 A0A0B4J269 797 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 KRBA1A5PL33 1030 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 GOLGA6L6A8MZA4 724 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 MYO1FO00160 1098 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 MEIS1O00470 390 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 CHL1O00533 1208 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 SIN3BO75182 1162 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 ARHGEF15O94989 841 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 CYP17A1P05093 508 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 BRAFP15056 766 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 FGFR2P21802 821 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 AMPD1P23109 780 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 MC4RP32245 332 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 HOXD13P35453 343 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 SEPHS1P49903 392 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 NLRP12P59046 1061 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 BECN1Q14457 450 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 TTLL4Q14679 1199 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 SMC1AQ14683 1233 aaKnown RBP4.56□□□□□ -1.68
SKP1-209ENST00000522552 DLGAP5Q15398 846 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 INF2Q27J81 1249 aa4.56□□□□□ -1.68
SKP1-209ENST00000522552 CCDC158Q5M9N0 1113 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms