RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 GBP3Q9H0R5 595 aa28.83■■■□□ 2.21
LAPTM4B-203ENST00000521545 NRDE2Q9H7Z3 1164 aa28.83■■■□□ 2.21
LAPTM4B-203ENST00000521545 RSAD1Q9HA92 442 aa28.83■■■□□ 2.21
LAPTM4B-203ENST00000521545 CNTNAP2Q9UHC6 1331 aa28.83■■■□□ 2.21
LAPTM4B-203ENST00000521545 FAM86C2PA6NEL3 165 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 INO80B-WBP1J3KQ70 363 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 DCXO43602 365 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 OR52Z1P0C646 297 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 ARL2P36404 184 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 TECP42680 631 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 RBM10P98175 930 aaKnown RBP28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 VN1R2Q8NFZ6 395 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 KANSL3Q9P2N6 904 aa28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 NOL7Q9UMY1 257 aaKnown RBP28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 USP15Q9Y4E8 981 aaPredicted RBP28.82■■■□□ 2.2
LAPTM4B-203ENST00000521545 A0A087WWV3 80 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 CXCL14O95715 111 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 GALTP07902 379 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 SPATA31C1P0DKV0 1188 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 TTC38Q5R3I4 469 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 UBXN11Q5T124 520 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 LLGL2Q6P1M3 1020 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 NOTUMQ6P988 496 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 TMEM184AQ6ZMB5 413 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 CATSPER3Q86XQ3 398 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 IFNLR1Q8IU57 520 aaPredicted RBP28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 NOSTRINQ8IVI9 506 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 TMEM87AQ8NBN3 555 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 ASAP3Q8TDY4 903 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 CCDC51Q96ER9 411 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 FAM193BQ96PV7 902 aaPredicted RBP28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 NACC1Q96RE7 527 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 UBN1Q9NPG3 1134 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 RAPGEFL1Q9UHV5 662 aa28.81■■■□□ 2.2
LAPTM4B-203ENST00000521545 USO1O60763 962 aaKnown RBP28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 NCLP19338 710 aaKnown RBP28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 CAPSQ13938 189 aa28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 VPS52Q8N1B4 723 aa28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 IGSF21Q96ID5 467 aa28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 POLR3CQ9BUI4 534 aaPredicted RBP28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 POLR3FQ9H1D9 316 aaPredicted RBP28.8■■■□□ 2.2
LAPTM4B-203ENST00000521545 C2orf71A6NGG8 1288 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 TSPAN1O60635 241 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 ITGA4P13612 1032 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 GLRA2P23416 452 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 TRAPPC10P48553 1259 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 KCNC3Q14003 757 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 ANKRD54Q6NXT1 300 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 DDX53Q86TM3 631 aaKnown RBP28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 C11orf16Q9NQ32 467 aa28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 DBR1Q9UK59 544 aaKnown RBP28.79■■■□□ 2.2
LAPTM4B-203ENST00000521545 MED24O75448 989 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 HOXB8P17481 243 aaPredicted RBP28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 MAEAQ7L5Y9 396 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 MCPH1Q8NEM0 835 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 CASP10Q92851 521 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 CPB2Q96IY4 423 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 NFKBIZQ9BYH8 718 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 CSRNP2Q9H175 543 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 DNAJB4Q9UDY4 337 aa28.78■■■□□ 2.2
LAPTM4B-203ENST00000521545 ALDH2P05091 517 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 RPA1P27694 616 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 SLC11A1P49279 550 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 MBTD1Q05BQ5 628 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 GIT2Q14161 759 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 RABEP1Q15276 862 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 TMEM173Q86WV6 379 aaPredicted RBP28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 ZNF280BQ86YH2 543 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 RNF135Q8IUD6 432 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 HACE1Q8IYU2 909 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 PHF7Q9BWX1 381 aaPredicted RBP28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 TRIM6Q9C030 488 aaPredicted RBP28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 ZBP1Q9H171 429 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 STK39Q9UEW8 545 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 KIF3AQ9Y496 699 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 IPPQ9Y573 584 aa28.77■■■□□ 2.2
LAPTM4B-203ENST00000521545 C5orf42Q9H799 3197 aa28.76■■■□□ 2.2
LAPTM4B-203ENST00000521545 ST18O60284 1047 aa28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 SMG8Q8ND04 991 aaKnown RBP28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 TMEM175Q9BSA9 504 aa28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 EIF2AQ9BY44 585 aaKnown RBP28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 FAN1Q9Y2M0 1017 aa28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 HCN4Q9Y3Q4 1203 aa28.76■■■□□ 2.19
LAPTM4B-203ENST00000521545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 LRRIQ4A6NIV6 560 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 PRR33A8MZF0 331 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 CLASP2O75122 1294 aaKnown RBP28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 DDHD2O94830 711 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 POMCP01189 267 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 CTSAP10619 480 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 TPRNQ4KMQ1 711 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 HAUS3Q68CZ6 603 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 SUSD6Q92537 303 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 S1PR5Q9H228 398 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 UPF2Q9HAU5 1272 aaKnown RBP28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 HCFC2Q9Y5Z7 792 aa28.75■■■□□ 2.19
LAPTM4B-203ENST00000521545 ARHGEF35A5YM69 484 aa28.74■■■□□ 2.19
LAPTM4B-203ENST00000521545 ARF4P18085 180 aaPredicted RBP28.74■■■□□ 2.19
LAPTM4B-203ENST00000521545 MUTP22033 750 aa28.74■■■□□ 2.19
LAPTM4B-203ENST00000521545 U2AF2P26368 475 aaKnown RBP eCLIP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms