RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 GFAPP14136 432 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 AP3M2P53677 418 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 GRAMD1AQ96CP6 724 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 HIC2Q96JB3 615 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MTRQ99707 1265 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZFP69BQ9UJL9 534 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 GH1P01241 217 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 DR1Q01658 176 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 ITPK1Q13572 414 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 BZW1Q7L1Q6 419 aaKnown RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF473Q8WTR7 871 aaKnown RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 PIDD1Q9HB75 910 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 TBK1Q9UHD2 729 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 PCDHA13Q9Y5I0 950 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 RARBP10826 455 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 QRICH1Q2TAL8 776 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 C1orf146Q5VVC0 180 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 CEP19Q96LK0 163 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 CCT8L2Q96SF2 557 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAFGO15525 162 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC26A4O43511 780 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SNUPNO95149 360 aaKnown RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 STX1BP61266 288 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 ATG16L1Q676U5 607 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 RUBCNQ92622 972 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 TXNP10599 105 aaKnown RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 RECQLP46063 649 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 VSNL1P62760 191 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 CYP2D6P10635 497 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 CCNE1P24864 410 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 PPARGP37231 505 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SKOR1P84550 965 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 NR1H3Q13133 447 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 ART3Q13508 389 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 MTMR2Q13614 643 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SGSM3Q96HU1 749 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 WARS2Q9UGM6 360 aaKnown RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 PLSCR1O15162 318 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 MDH1P40925 334 aaKnown RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 PDE1BQ01064 536 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 RNF180Q86T96 592 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 NXF1Q9UBU9 619 aaKnown RBP13.05□□□□□ -0.32
PCDHGA6-201ENST00000517434 HNRNPCL1O60812 293 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 PYGBP11216 843 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC20A2Q08357 652 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 PPP2R5CQ13362 524 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 TMEM154Q6P9G4 183 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 FAM47EQ6ZV65 393 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 ICA1LQ8NDH6 482 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 RWDD2AQ9UIY3 292 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 PREX1Q8TCU6 1659 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 PODXLO00592 558 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 KRT75O95678 551 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SCP2P22307 547 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 RGS2P41220 211 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 MESDQ14696 234 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 ADCK5Q3MIX3 580 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 IER5Q5VY09 327 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 BSPRYQ5W0U4 402 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SCYL1Q96KG9 808 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 MRPL4Q9BYD3 311 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 STK25O00506 426 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 EPHX2P34913 555 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 NNMTP40261 264 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 RESTQ13127 1097 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms