RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ARF1P84077 181 aaKnown RBP4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 CTBSQ01459 385 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 CUL4AQ13619 759 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLS1Q14651 629 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 TTLL4Q14679 1199 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 GPR19Q15760 415 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 DBN1Q16643 649 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 INF2Q27J81 1249 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 MUM1Q2TAK8 710 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 CPZQ66K79 652 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SULT6B1Q6IMI4 303 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 PSAPL1Q6NUJ1 521 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC30A6Q6NXT4 461 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 MRPL14Q6P1L8 145 aaKnown RBP4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 ESPNLQ6ZVH7 1005 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 RTL10Q7L3V2 364 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 TMC3Q7Z5M5 1100 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 MILR1Q7Z6M3 343 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SH2D3CQ8N5H7 860 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 OR10H5Q8NGA6 315 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 OR8H1Q8NGG4 311 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 IPO4Q8TEX9 1081 aaKnown RBP4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 HERVK_113Q902F9 699 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 DPF2Q92785 391 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 RGMAQ96B86 450 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 HIC2Q96JB3 615 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 C7orf26Q96N11 449 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 FCRL3Q96P31 734 aaPredicted RBP4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 FANCD2OSQ96PS1 177 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SPAG5Q96R06 1193 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 TXLNGYQ9BZA5 131 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZWILCHQ9H900 591 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 ABCF3Q9NUQ8 709 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 PRR13Q9NZ81 148 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SEL1LQ9UBV2 794 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 CPA4Q9UI42 421 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 MAN2B2Q9Y2E5 1009 aa4.47□□□□□ -1.69
RNU4-60P-201ENST00000517239 SOS1Q07889 1333 aaPredicted RBP4.46□□□□□ -1.69
RNU4-60P-201ENST00000517239 PRSS38A1L453 326 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 H7C1W4 665 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 RBAK-RBAKDNI3L0D1 243 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 HNRNPDLO14979 420 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PRAMEF1O95521 474 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CLTBP09497 229 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 MYL4P12829 197 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 IFNGR1P15260 489 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 FGFR2P21802 821 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 FGFR3P22607 806 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 MC4RP32245 332 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ABCD1P33897 745 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 TDO2P48775 406 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PAPOLAP51003 745 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 RNASE9P60153 205 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 DSC2Q02487 901 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 LSAMPQ13449 338 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC12A1Q13621 1099 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 MOGSQ13724 837 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SCARF1Q14162 830 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ERV3-1Q14264 604 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 BECN1Q14457 450 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SUZ12Q15022 739 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PTPN14Q15678 1187 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PKN2Q16513 984 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCDC158Q5M9N0 1113 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM26FQ5R3K3 315 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM182BQ5T319 152 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 THEMIS2Q5TEJ8 643 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 TIGD7Q6NT04 549 aaPredicted RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PLBD1Q6P4A8 553 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CNKSR3Q6P9H4 555 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CPLX2Q6PUV4 134 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 HHIPL2Q6UWX4 724 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 B4GALNT4Q76KP1 1039 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 RASGRP2Q7LDG7 609 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 DNAJB7Q7Z6W7 309 aaPredicted RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF598Q86UK7 904 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CHD1LQ86WJ1 897 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 KSR1Q8IVT5 923 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 MFSD2AQ8NA29 543 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SPPL3Q8TCT6 385 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 STYXQ8WUJ0 223 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 NUDT8Q8WV74 236 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 AFG1LQ8WV93 481 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 RNF141Q8WVD5 230 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 TTC9Q92623 222 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 HDAC10Q969S8 669 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ISL2Q96A47 359 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 OTUD5Q96G74 571 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CNDP2Q96KP4 475 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 COG8Q96MW5 612 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 JAKMIP1Q96N16 626 aaKnown RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 ACE2Q9BYF1 805 aaPredicted RBP4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 SACM1LQ9NTJ5 587 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 CLDND1Q9NY35 253 aa4.46□□□□□ -1.7
RNU4-60P-201ENST00000517239 FRRS1LQ9P0K9 344 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms