RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ARID2Q68CP9 1835 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 ATG2AQ2TAZ0 1938 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 CYP11B2P19099 503 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 NCLP19338 710 aaKnown RBP25.56■■□□□ 1.68
CLDND1-230ENST00000514537 NRIP1P48552 1158 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 ALDH7A1P49419 539 aaKnown RBP25.56■■□□□ 1.68
CLDND1-230ENST00000514537 BCAR1P56945 870 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 NCBP1Q09161 790 aaKnown RBP25.56■■□□□ 1.68
CLDND1-230ENST00000514537 IL17AQ16552 155 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 NOTUMQ6P988 496 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 RBM23Q86U06 439 aaKnown RBP25.56■■□□□ 1.68
CLDND1-230ENST00000514537 CCDC51Q96ER9 411 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 TLE6Q9H808 572 aa25.56■■□□□ 1.68
CLDND1-230ENST00000514537 ARHGEF35A5YM69 484 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 TBX10O75333 385 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 SMG8Q8ND04 991 aaKnown RBP25.55■■□□□ 1.68
CLDND1-230ENST00000514537 CNNM3Q8NE01 707 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 CPB2Q96IY4 423 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 BACH2Q9BYV9 841 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 NRDE2Q9H7Z3 1164 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 KIAA1024Q9UPX6 916 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 INPP5FQ9Y2H2 1132 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 CNTNAP2Q9UHC6 1331 aa25.55■■□□□ 1.68
CLDND1-230ENST00000514537 ARF4P18085 180 aaPredicted RBP25.54■■□□□ 1.68
CLDND1-230ENST00000514537 DTHD1Q6ZMT9 781 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 FAM178BQ8IXR5 827 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 SNX29Q8TEQ0 813 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 TCF25Q9BQ70 676 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 EIF2AQ9BY44 585 aaKnown RBP25.54■■□□□ 1.68
CLDND1-230ENST00000514537 CSRNP2Q9H175 543 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 RSAD1Q9HA92 442 aa25.54■■□□□ 1.68
CLDND1-230ENST00000514537 NGRNQ9NPE2 291 aaKnown RBP25.54■■□□□ 1.68
CLDND1-230ENST00000514537 PLXNA4Q9HCM2 1894 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 CARNS1A5YM72 827 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 LRRIQ4A6NIV6 560 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 NT5C1B-RDH14C9J2C7 533 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 PER2O15055 1255 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 ZC3H11AO75152 810 aaKnown RBP eCLIP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 ATP2C1P98194 919 aaPredicted RBP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 CUL4AQ13619 759 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 LARP1BQ659C4 914 aaKnown RBP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 CDCA2Q69YH5 1023 aaPredicted RBP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 CDCA3Q99618 268 aaPredicted RBP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 UBN1Q9NPG3 1134 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 DDX19AQ9NUU7 478 aaKnown RBP25.53■■□□□ 1.68
CLDND1-230ENST00000514537 CLEC1BQ9P126 229 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 FAM50BQ9Y247 325 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 IPPQ9Y573 584 aa25.53■■□□□ 1.68
CLDND1-230ENST00000514537 B4GALT5O43286 388 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 GALTP07902 379 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 NDUFV1P49821 464 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 AFF1P51825 1210 aaKnown RBP25.52■■□□□ 1.68
CLDND1-230ENST00000514537 RNASELQ05823 741 aaKnown RBP25.52■■□□□ 1.68
CLDND1-230ENST00000514537 DUSP6Q16828 381 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 PLPP4Q5VZY2 271 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 KRT79Q5XKE5 535 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 PPP4R3CPQ6ZMV5 832 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 ZNF280BQ86YH2 543 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 URGCPQ8TCY9 931 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 BSNDQ8WZ55 320 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 MSLNLQ96KJ4 702 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 BHMT2Q9H2M3 363 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 KANSL3Q9P2N6 904 aa25.52■■□□□ 1.68
CLDND1-230ENST00000514537 A0A1B0GUA9 196 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 PP2D1A8MPX8 630 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 GLP2RO95838 553 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 ITGA4P13612 1032 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 CLUL1Q15846 466 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 TMC7Q7Z402 723 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 TMEM173Q86WV6 379 aaPredicted RBP25.51■■□□□ 1.67
CLDND1-230ENST00000514537 TMEM169Q96HH4 297 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 PRIMPOLQ96LW4 560 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 MMTAG2Q9BU76 263 aaKnown RBP25.51■■□□□ 1.67
CLDND1-230ENST00000514537 RNF39Q9H2S5 420 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 FZD8Q9H461 694 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 CD320Q9NPF0 282 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 ENTPD7Q9NQZ7 604 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 PRMT7Q9NVM4 692 aaPredicted RBP25.51■■□□□ 1.67
CLDND1-230ENST00000514537 CD207Q9UJ71 328 aa25.51■■□□□ 1.67
CLDND1-230ENST00000514537 FSD2A1L4K1 749 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 HIDE1A8MVS5 230 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 MBTPS2O43462 519 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 CDC25AP30304 524 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 FAM187BQ17R55 369 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 ZBTB8OSQ8IWT0 167 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 IGSF21Q96ID5 467 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 C2orf40Q9H1Z8 148 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 DNAJB4Q9UDY4 337 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 DNM3Q9UQ16 869 aa25.5■■□□□ 1.67
CLDND1-230ENST00000514537 INPPL1O15357 1258 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 B4GALT3O60512 393 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 DDHD2O94830 711 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 EYA4O95677 639 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 NAMPTP43490 491 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 SLC11A1P49279 550 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 COASYQ13057 564 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 SMAD4Q13485 552 aaKnown RBP25.49■■□□□ 1.67
CLDND1-230ENST00000514537 SMAD2Q15796 467 aaKnown RBP25.49■■□□□ 1.67
CLDND1-230ENST00000514537 SLC27A1Q6PCB7 646 aa25.49■■□□□ 1.67
CLDND1-230ENST00000514537 GJD3Q8N144 294 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms