RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ICA1Q05084 483 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 FUKQ8N0W3 1084 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 METTL13Q8N6R0 699 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 TRIML2Q8N7C3 387 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 CCT6BQ92526 530 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 EFHD1Q9BUP0 239 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 POTECB2RU33 542 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 TOM1L1O75674 476 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 KCNA3P22001 575 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 KCNQ4P56696 695 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 AP3B2Q13367 1082 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 NLRX1Q86UT6 975 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 DEPTORQ8TB45 409 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 ARHGAP10A1A4S6 786 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM47DPA6NHR8 397 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 EDRF1Q3B7T1 1238 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 KRT80Q6KB66 452 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 CEP70Q8NHQ1 597 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 ACTRT1Q8TDG2 376 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 EHD4Q9H223 541 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 HEMGNQ9BXL5 484 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 DRC3Q9H069 523 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 CRCPO75575 148 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 DNAJC24Q6P3W2 148 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 CPXCR1Q8N123 301 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 ZNF577Q9BSK1 485 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 TRABDQ9H4I3 376 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM96AQ9H5X1 160 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 TMEM260Q9NX78 707 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 ARHGAP20Q9P2F6 1191 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 PABPN1LA6NDY0 278 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 HNRNPDLO14979 420 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 SLC16A3O15427 465 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 ASAP2O43150 1006 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 PGM1P36871 562 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 CREG2Q8IUH2 290 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 TEKT4Q8WW24 435 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 STK33Q9BYT3 514 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 CARD9Q9H257 536 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 ZFATQ9P243 1243 aa18.36■□□□□ 0.53
HMGXB3-201ENST00000502717 O00370 1275 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 IZUMO3Q5VZ72 239 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 ATL2Q8NHH9 583 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 DLGAP2Q9P1A6 1054 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 CEP170BQ9Y4F5 1589 aaPredicted RBP18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 C1orf54Q8WWF1 131 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 AGPAT1Q99943 283 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 SSX2IPQ9Y2D8 614 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 TDP2O95551 362 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 KRT19P08727 400 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 TMEM253P0C7T8 217 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 UBE2Q2LH0YL09 131 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 SLC12A2P55011 1212 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 PPP2R5DQ14738 602 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 MEA1Q16626 185 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 MMEL1Q495T6 779 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 ANO5Q75V66 913 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 SERPINB12Q96P63 405 aa18.35■□□□□ 0.53
HMGXB3-201ENST00000502717 SFI1A8K8P3 1242 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 BTNL9Q6UXG8 535 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 HACE1Q8IYU2 909 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 TPCN2Q8NHX9 752 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 MIEF2Q96C03 454 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 NARFQ9UHQ1 456 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 SERPINB13Q9UIV8 391 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 APOBEC2Q9Y235 224 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 A0A087X0T9 212 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 ZBTB24O43167 697 aaPredicted RBP18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM228BP0C875 321 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 P4HA1P13674 534 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 MEI1Q5TIA1 1274 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 ZBTB10Q96DT7 871 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 GDF3Q9NR23 364 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 WDR70Q9NW82 654 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 CSF1RP07333 972 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 ACADSP16219 412 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 VHLP40337 213 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 DYNLT1P63172 113 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 SEL1LQ9UBV2 794 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 SRP68Q9UHB9 627 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 NCF2P19878 526 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms