RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 STRA6Q9BX79 667 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 SLX4Q8IY92 1834 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 CLRN2A0PK11 232 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 DNM1LO00429 736 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 ATP2C2O75185 946 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 RPL21P46778 160 aaKnown RBP14.05□□□□□ -0.16
PTPN7-217ENST00000495688 SLC29A2Q14542 456 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 MEX3CQ5U5Q3 659 aaKnown RBP14.05□□□□□ -0.16
PTPN7-217ENST00000495688 CDAN1Q8IWY9 1227 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 MASTLQ96GX5 879 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 SERPINA10Q9UK55 444 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 ODF2LQ9ULJ1 636 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 SGPL1O95470 568 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 ITGB5P18084 799 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 COMTP21964 271 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 PMS2P54278 862 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 ACTN3Q08043 901 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-217ENST00000495688 C1orf220Q5T0J3 134 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 PADI6Q6TGC4 694 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 STXBP4Q6ZWJ1 553 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 TLCD1Q96CP7 247 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 MRIQ9BWK5 157 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 VCPKMTQ9H867 229 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 GRHL1Q9NZI5 618 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 PTPN22Q9Y2R2 807 aa14.05□□□□□ -0.16
PTPN7-217ENST00000495688 AFF2P51816 1311 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 RPTORQ8N122 1335 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 GOLGA8IPA6NC78 632 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 GOLGA8JA6NMD2 632 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 SRRM3A6NNA2 597 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 ANKRD63C9JTQ0 380 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 VIL1P09327 827 aaKnown RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 PTGIRP43119 386 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 GLIS2Q9BZE0 524 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 PABPC3Q9H361 631 aaKnown RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 ATRNL1Q5VV63 1379 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 PYGMP11217 842 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 BCRP11274 1271 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 FGFR4P22455 802 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 PDE6BP35913 854 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 SLCO1A2P46721 670 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 KCNJ1P48048 391 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 VAMP7P51809 220 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 B3GNT9Q6UX72 402 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 NEK9Q8TD19 979 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 NAP1L3Q99457 506 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 TEKT3Q9BXF9 490 aa14.04□□□□□ -0.16
PTPN7-217ENST00000495688 DIS3Q9Y2L1 958 aaKnown RBP14.04□□□□□ -0.16
PTPN7-217ENST00000495688 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CTNND1O60716 968 aaKnown RBP14.03□□□□□ -0.16
PTPN7-217ENST00000495688 PAEPP09466 180 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CHRNB2P17787 502 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CCDC121Q6ZUS5 278 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CPLX4Q7Z7G2 160 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 NOP9Q86U38 636 aaKnown RBP14.03□□□□□ -0.16
PTPN7-217ENST00000495688 SLC47A2Q86VL8 602 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 SLC9A9Q8IVB4 645 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 RHOT2Q8IXI1 618 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 KCTD17Q8N5Z5 321 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 TATDN2Q93075 761 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 UBE4BO95155 1302 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CYP26A1O43174 497 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 PHF2O75151 1096 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CHN1P15882 459 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 PEX5P50542 639 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 GPC5P78333 572 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 CCDC137Q6PK04 289 aaKnown RBP14.03□□□□□ -0.16
PTPN7-217ENST00000495688 NSMFQ6X4W1 530 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 EPS8L1Q8TE68 723 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 POP1Q99575 1024 aaKnown RBP14.03□□□□□ -0.16
PTPN7-217ENST00000495688 SELENOSQ9BQE4 189 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 ADAM7Q9H2U9 754 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 AZI2Q9H6S1 392 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 COL20A1Q9P218 1284 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
PTPN7-217ENST00000495688 GOLGA6L7A0A1B0GV03 622 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 CALCAP01258 141 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 DRD4P21917 467 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 DHX34Q14147 1143 aaKnown RBP14.02□□□□□ -0.16
PTPN7-217ENST00000495688 EPC2Q52LR7 807 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 DENND2CQ68D51 928 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 LDHDQ86WU2 507 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 PPM1KQ8N3J5 372 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 EPS8L3Q8TE67 593 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms