RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GUF1Q8N442 669 aaKnown RBP13.67□□□□□ -0.22
SNX17-208ENST00000493711 GOLGA5Q8TBA6 731 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 ZNF507Q8TCN5 953 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 FDXACB1Q9BRP7 624 aaPredicted RBP13.67□□□□□ -0.22
SNX17-208ENST00000493711 NOC4LQ9BVI4 516 aaKnown RBP13.67□□□□□ -0.22
SNX17-208ENST00000493711 STRA6Q9BX79 667 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 HIPK3Q9H422 1215 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 POLD4Q9HCU8 107 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 SLC39A2Q9NP94 309 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
SNX17-208ENST00000493711 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 CDY2AQ9Y6F7 541 aa13.67□□□□□ -0.22
SNX17-208ENST00000493711 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 BIN1O00499 593 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 PSMA7O14818 248 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 KIAA0355O15063 1070 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 GPR182O15218 404 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 NMT1P30419 496 aaKnown RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 AXLP30530 894 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 RFC2P35250 354 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 MGAT3Q09327 533 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 STK4Q13043 487 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 MAP4K3Q8IVH8 894 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 KSR1Q8IVT5 923 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 NAT10Q9H0A0 1025 aaKnown RBP13.66□□□□□ -0.22
SNX17-208ENST00000493711 FZD8Q9H461 694 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 TBC1D7Q9P0N9 293 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 FRMPD3Q5JV73 1810 aa13.66□□□□□ -0.22
SNX17-208ENST00000493711 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 ACKR2O00590 384 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 SNPHO15079 494 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 ERLIN2O94905 339 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 CHRNA1P02708 482 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 PRKCBP05771 671 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
SNX17-208ENST00000493711 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
SNX17-208ENST00000493711 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 FOXR2Q6PJQ5 311 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 ZPBP2Q6X784 338 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 HS2ST1Q7LGA3 356 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 WNT8BQ93098 351 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 OSMRQ99650 979 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 MRPL4Q9BYD3 311 aaKnown RBP13.65□□□□□ -0.22
SNX17-208ENST00000493711 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 GINS2Q9Y248 185 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 COL6A3P12111 3177 aa13.65□□□□□ -0.22
SNX17-208ENST00000493711 BICDL2A1A5D9 508 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 SYCE3A1L190 88 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 RPS6KA5O75582 802 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 PIGRP01833 764 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 CTSHP09668 335 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 MYBP10242 640 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 ERCC5P28715 1186 aaPredicted RBP13.64□□□□□ -0.23
SNX17-208ENST00000493711 MBTD1Q05BQ5 628 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 TYRO3Q06418 890 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 PRPF4BQ13523 1007 aaKnown RBP13.64□□□□□ -0.23
SNX17-208ENST00000493711 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 SLFN12LQ6IEE8 588 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 CATSPER4Q7RTX7 472 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 KIAA0895Q8NCT3 520 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 BICD1Q96G01 975 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 TSG101Q99816 390 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 CHST12Q9NRB3 414 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
SNX17-208ENST00000493711 H0YGN5 161 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 PDXKO00764 312 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
SNX17-208ENST00000493711 EVI5O60447 810 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 TIMP1P01033 207 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 IQCF3P0C7M6 154 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 RAG1P15918 1043 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 PRCPP42785 496 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 LIG4P49917 911 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 LRRC63Q05C16 580 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 PAK2Q13177 524 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 ZC2HC1CQ53FD0 456 aaPredicted RBP13.63□□□□□ -0.23
SNX17-208ENST00000493711 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 APBB2Q92870 758 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 HPS3Q969F9 1004 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 PPP1R16BQ96T49 567 aa13.63□□□□□ -0.23
SNX17-208ENST00000493711 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms