RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 PRPF31Q8WWY3 499 aaKnown RBP10.18□□□□□ -0.78
NFIA-213ENST00000493627 AUTS2Q8WXX7 1259 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 PGBD4Q96DM1 585 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 DYDC2Q96IM9 177 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 NECTIN4Q96NY8 510 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 ZSWIM4Q9H7M6 989 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 MINDY3Q9H8M7 445 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 RSAD1Q9HA92 442 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 DNAJB4Q9UDY4 337 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 WDFY4Q6ZS81 3184 aa10.18□□□□□ -0.78
NFIA-213ENST00000493627 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 BAG4O95429 457 aaKnown RBP10.17□□□□□ -0.78
NFIA-213ENST00000493627 LARGE1O95461 756 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 CXCL14O95715 111 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
NFIA-213ENST00000493627 SLC11A1P49279 550 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 NHLH1Q02575 133 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 ITIH3Q06033 890 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 SIGLEC14Q08ET2 396 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 GIT2Q14161 759 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 CTTNQ14247 550 aaKnown RBP10.17□□□□□ -0.78
NFIA-213ENST00000493627 ME3Q16798 604 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 OTUD6AQ7L8S5 288 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 DDX53Q86TM3 631 aaKnown RBP10.17□□□□□ -0.78
NFIA-213ENST00000493627 FERMT3Q86UX7 667 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 SUGP1Q8IWZ8 645 aaKnown RBP10.17□□□□□ -0.78
NFIA-213ENST00000493627 TMEM87AQ8NBN3 555 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 MTRQ99707 1265 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 ADAM7Q9H2U9 754 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 POMKQ9H5K3 350 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 DZANK1Q9NVP4 752 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 NR2E1Q9Y466 385 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 IRAK3Q9Y616 596 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 ARID2Q68CP9 1835 aa10.17□□□□□ -0.78
NFIA-213ENST00000493627 ZBTB39O15060 712 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 ERLIN2O94905 339 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 EPCAMP16422 314 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 HOXA11P31270 313 aaPredicted RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 MTHFRP42898 656 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 AFF1P51825 1210 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 FOSBP53539 338 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 PTPN14Q15678 1187 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 CALCRLQ16602 461 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 UBXN11Q5T124 520 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 RARS2Q5T160 578 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 MRPL10Q7Z7H8 261 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 ALYREFQ86V81 257 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 ZNF280BQ86YH2 543 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 TPH2Q8IWU9 490 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 FBXL6Q8N531 539 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 RIPOR3Q96MK2 946 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 EIF2AK1Q9BQI3 630 aaKnown RBP10.16□□□□□ -0.78
NFIA-213ENST00000493627 TMEM175Q9BSA9 504 aa10.16□□□□□ -0.78
NFIA-213ENST00000493627 C2CD4DB7Z1M9 353 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 WNT7AO00755 349 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 ASAP2O43150 1006 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 NEMFO60524 1076 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 TSPAN1O60635 241 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 JAK2O60674 1132 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 DDHD2O94830 711 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 SLITRK3O94933 977 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 LYPLA2O95372 231 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 POMCP01189 267 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 WEE2P0C1S8 567 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 MRE11P49959 708 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 PTENP60484 403 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 TFDP1Q14186 410 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 MXD4Q14582 209 aaPredicted RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 PCBP1Q15365 356 aaKnown RBP eCLIP10.15□□□□□ -0.78
NFIA-213ENST00000493627 KIAA1841Q6NSI8 718 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 NOTUMQ6P988 496 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 DIS3L2Q8IYB7 885 aaKnown RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 C12orf76Q8N812 135 aaPredicted RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 ASAP3Q8TDY4 903 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 SLC22A17Q8WUG5 538 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 ASIC4Q96FT7 647 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 CCDC43Q96MW1 224 aaKnown RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 FAM193BQ96PV7 902 aaPredicted RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 TTC12Q9H892 705 aaPredicted RBP10.15□□□□□ -0.78
NFIA-213ENST00000493627 MARCH5Q9NX47 278 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 KANSL3Q9P2N6 904 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 STK39Q9UEW8 545 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 PCDHA12Q9UN75 941 aa10.15□□□□□ -0.78
NFIA-213ENST00000493627 IPPQ9Y573 584 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms