RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SAP30BPQ9UHR5 308 aaKnown RBP6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 A0A1W2PR48 441 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 ALDH1L1O75891 902 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 NPEPPSP55786 919 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 DUSP2Q05923 314 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 RIN1Q13671 783 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 ACAP1Q15027 740 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 PCBP2Q15366 365 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 ADRM1Q16186 407 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 GJC2Q5T442 439 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 PIK3C3Q8NEB9 887 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 STAG1Q8WVM7 1258 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 CHMP4CQ96CF2 233 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 GNRHR2Q96P88 292 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 SLC2A13Q96QE2 648 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 OR14A2Q96R54 314 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 PTPN18Q99952 460 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 MEGF9Q9H1U4 602 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 EPC1Q9H2F5 836 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 NELFAQ9H3P2 528 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 GREM2Q9H772 168 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 ING3Q9NXR8 418 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 PPP4R1LQ9P1A2 415 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 DNM3Q9UQ16 869 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 PCDHGA2Q9Y5H1 932 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 TNKSO95271 1327 aa6.49□□□□□ -1.37
HMGB1P38-201ENST00000490557 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 MTSS1O43312 755 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 AKR1B10O60218 316 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 PHF2O75151 1096 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 NEK2P51955 445 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 SLC16A1P53985 500 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 WNT3AP56704 352 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 PLP2Q04941 152 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 MALLQ13021 153 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 ODR4Q5SWX8 454 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 LIMS2Q7Z4I7 341 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 CFHR4Q92496 578 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
HMGB1P38-201ENST00000490557 PMS2P1A4D2B8 440 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 MATN2O00339 956 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 CT47B1P0C2W7 299 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 CTSSP25774 331 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 RECQLP46063 649 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 PER3P56645 1201 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 KRT85P78386 507 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 NOMO1Q15155 1222 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 CMTM4Q8IZR5 234 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 OR5M3Q8NGP4 307 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 ZNF480Q8WV37 535 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 SNX33Q8WV41 574 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 RIN2Q8WYP3 895 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 JADE3Q92613 823 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 RELTQ969Z4 430 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 UHRF1Q96T88 793 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 TCF25Q9BQ70 676 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 PLA2G12BQ9BX93 195 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 SLC13A1Q9BZW2 595 aa6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 ZNF277Q9NRM2 450 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 LUC7L2Q9Y383 392 aaKnown RBP6.47□□□□□ -1.37
HMGB1P38-201ENST00000490557 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 K7ESM1 405 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 TMEM127O75204 238 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 NDUFS2O75306 463 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 GSPT1P15170 499 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 GYPEP15421 78 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 ECHS1P30084 290 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 HHEXQ03014 270 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 GRM7Q14831 915 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 TTF1Q15361 905 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 PLEKHG6Q3KR16 790 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 C19orf54Q5BKX5 351 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 ABHD15Q6UXT9 468 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 CHST13Q8NET6 341 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 CXorf38Q8TB03 319 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 TEKT5Q96M29 485 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 PUS7Q96PZ0 661 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 GPHA2Q96T91 129 aa6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 CDC5LQ99459 802 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 RBM12Q9NTZ6 932 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 ZFR2Q9UPR6 939 aaKnown RBP6.46□□□□□ -1.38
HMGB1P38-201ENST00000490557 ITGB3P05106 788 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 SYN1P17600 705 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 HS1BP3Q53T59 392 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 TCTN3Q6NUS6 607 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 GPR135Q8IZ08 494 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 C20orf173Q96LM9 149 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms